Pragia fontium: QQ39_03855
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Entry
QQ39_03855 CDS
T03952
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pfq
Pragia fontium
Brite
KEGG Orthology (KO) [BR:
pfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfq03400
]
QQ39_03855
DNA repair and recombination proteins [BR:
pfq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QQ39_03855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
RecA
Rad51
GvpD_P-loop
ABC_tran
SLFN-g3_helicase
AAA_14
DUF7125
AAA_16
AAA
nSTAND3
AAA_24
NTPase_1
AAA_29
Zeta_toxin
cobW
NACHT
PAXNEB
DZR
AAA_5
Viral_helicase1
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AKJ41312
LinkDB
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Position
949872..951251
Genome browser
AA seq
459 aa
AA seq
DB search
MAKPAKRAFVCNECGADYPRWQGQCSACNAWNSITEIRLAAASSSRVDRFSGYAGDAGIS
RVQKLSDISLDELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTMCKLAG
QMKTLYVTGEESLQQVAMRAHRLGLPTEHLQMLSETSIEQICLIAEQEQPRLMVIDSIQV
MHMADIQSSPGSVAQVRETAAYLTRFAKTKGVAIIMVGHVTKDGSLAGPKVLEHCIDCSV
LLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLKEISNPSAIFLSRGDEITSGSSVM
VVWEGSRPLLVEIQALVDHSMLSNPRRVAVGLEQNRLALLLAVLHRHGGLQMADQDVFVN
VVGGVKVTETSADLALLLSLVSSLRDRPLPEDLVVFGEVGLAGEIRPVPSGQERISEAAK
HGFKRAIVPHANVPKKSLPNMQVFGVKKLSDALSVLEDL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctaagccggcaaagcgtgcttttgtatgtaatgaatgtggtgcggattatccgcgt
tggcaggggcagtgtagcgcttgcaacgcgtggaatagcattactgaaattcgtctggcg
gcggcctcctcttcccgagtcgatcgtttctccggctatgccggagatgctggcatcagc
cgagtacaaaagctatcggatattagtctggatgagctaccgcgcttctctaccggtttt
aaagagtttgaccgtgttttgggcggcggagtggtaccgggcagcgccattctgattggc
ggtaatccgggtgcgggtaaaagtaccttattgctacaaaccatgtgtaaattggccggg
caaatgaagacgctgtacgttaccggcgaggagtctttacagcaagttgccatgcgcgct
caccgtctgggtttacccaccgagcatttacagatgctgtctgaaaccagcattgagcaa
atttgcctgatcgctgagcaagaacagccgcgtctgatggtgattgactctattcaggtg
atgcatatggccgatattcagtcatctcccggtagcgtggcacaggtgcgggaaacggcg
gcctatctgacccgttttgccaaaaccaaaggcgtggcgattattatggtcggtcacgta
acgaaagatggttctttggctggccctaaggtattggagcactgtatcgactgctcggta
ttgctggatggggatgccgactcccgttttcgcacattgcgcagtcataaaaaccgcttt
ggtgccgtgaatgagttgggggtctttgccatgacggagcaagggctaaaagagatcagt
aatccttccgccattttcctcagtcgaggggatgaaattacctccggtagttcagttatg
gtggtatgggaaggttctcgtccgttgctggtggaaattcaggctttggtcgatcactcc
atgttgtctaacccacgccgggtggcggtagggctggaacagaatcgtttggcgctgctg
ctggcggtgctgcaccgtcatggcggtttacaaatggccgatcaggacgtgtttgttaac
gtggtgggtggcgttaaagtgacggaaaccagcgctgacttggcgttgttgctttctctg
gtctccagtttacgtgacaggccactgccggaagatttagtggtgttcggcgaagtgggg
ctggccggtgagattcgcccggtacccagcggtcaggaacgcatttctgaagcagccaag
cacggctttaagcgcgctattgtgccgcatgctaatgtaccgaaaaaaagcttaccgaat
atgcaggtgtttggtgtgaagaagctgtctgatgcgttgagtgtgttggaagatctttaa
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