Pragia fontium: QQ39_05325
Help
Entry
QQ39_05325 CDS
T03952
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pfq
Pragia fontium
Pathway
pfq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QQ39_05325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfq03400
]
QQ39_05325
Enzymes [BR:
pfq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
QQ39_05325
DNA repair and recombination proteins [BR:
pfq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QQ39_05325
Prokaryotic type
QQ39_05325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AKJ41572
LinkDB
All DBs
Position
complement(1249945..1250622)
Genome browser
AA seq
225 aa
AA seq
DB search
MSEKLTWHDVIGQEKLQPYFQDTLKFVACERAAGKVIYPPQKDVFNAFSSTELADIKVVI
LGQDPYHGPNQAHGLSFSVLPGIQPPPSLVNMYKELITDIPGFQRPNHGYLQSWAEQGVM
LLNTVLTVEAGKAHSHASLGWETFTDKVIAAINENRDGVVFMLWGAHAQKKGRIIDRQRH
HVLAAPHPSPLSAHRGFLGCKHFSQANMLLEKQGLTPIKWQLDNL
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaactaacctggcatgatgttatcggtcaggaaaaactgcagccctacttt
caggacacgctaaaatttgttgcctgtgaaagagctgctggcaaagttatttatccaccg
cagaaagacgtattcaatgctttcagttcaactgaactggcagatattaaagtggtgatt
ctggggcaagatccttatcacggcccaaatcaggcccatggcctatctttctcggttctg
ccgggtatccagcctcccccatcactggtgaatatgtataaagaactcatcaccgatatc
cccggattccaacggcctaatcacggctacctgcaaagctgggccgaacagggcgtgatg
ttactcaataccgtattaaccgtagaagcaggcaaagcccactcccatgccagtctgggt
tgggaaacctttaccgataaagtgattgcggctatcaatgaaaaccgcgacggcgttgtg
tttatgttatggggcgctcatgcgcagaaaaaaggccgcattatcgatcgtcaacgccat
cacgttttagccgcaccacacccatcaccactatcagcccaccgtggttttttaggctgt
aaacacttctcgcaggccaatatgctactggaaaaacagggtttaacaccgattaaatgg
cagttggataacctctaa
DBGET
integrated database retrieval system
