Pragia fontium: QQ39_05390
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Entry
QQ39_05390 CDS
T03952
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pfq
Pragia fontium
Pathway
pfq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QQ39_05390 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfq03400
]
QQ39_05390 (recO)
DNA repair and recombination proteins [BR:
pfq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QQ39_05390 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QQ39_05390 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AKJ43772
LinkDB
All DBs
Position
1262110..1262853
Genome browser
AA seq
247 aa
AA seq
DB search
MDGWQRAFVLHGRPYSETSLLLDLFTESHGRIKLLAKGARSRRSQLKGCLQPFTPLLVRW
GGKGGVKTLRGAEAVSLSLPLSGLSLYSGLYVNEVLSRVLEDETPYSSLFFDYLECIQSL
AGLSGSPEMVLRRFELALLGHLGYGIDFLHCAGSGEPVSDSMTYRYRQEKGFIASLVVDH
LTFTGRDLVALAERTFPDADTLRAAKRFTRIALKPYLGGKPLKSRELFRQFSVKKSPDPV
VLPNDSE
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atagacggctggcagcgggcttttgtacttcacggtcgaccttacagtgaaaccagtcta
ttactggatctattcactgaaagccacggtagaattaagctgctggcgaaaggagcccgc
agtcgtcgttctcagctaaaaggctgcttgcagccttttacgccgttactggttcgctgg
ggcggcaaaggtggcgtaaaaaccttacgtggcgccgaagctgtgtctctctccttaccg
ctttcaggcttaagcttgtatagcgggctatacgtcaatgaagttttgtctcgagtgctt
gaagacgaaacaccatactcctcattattttttgattatctggaatgcatccaatccctg
gctggcctatcgggttcgccggaaatggttttgcgtcgttttgaattggctttgttggga
catttgggatacggcattgattttctgcactgtgcagggagtggcgagccggtatcggac
agcatgacctatcgttatcggcaagagaaaggctttatcgccagtctggtagttgatcat
ctgactttcaccggtcgtgatttagtggccttagctgaacgtaccttcccggacgcggac
acattacgcgccgctaagcgcttcactcgtatagcgctgaaaccttatttggggggcaag
ccgttaaaaagtcgtgagctgtttcgccagtttagcgtaaaaaaatcacctgaccccgtg
gtattacctaacgacagtgaatag
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