Pragia fontium: QQ39_05495
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Entry
QQ39_05495 CDS
T03952
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pfq
Pragia fontium
Brite
KEGG Orthology (KO) [BR:
pfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfq03016
]
QQ39_05495 (truD)
Enzymes [BR:
pfq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
QQ39_05495 (truD)
Transfer RNA biogenesis [BR:
pfq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QQ39_05495 (truD)
Prokaryotic type
QQ39_05495 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AKJ43773
LinkDB
All DBs
Position
1285425..1286465
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AA seq
346 aa
AA seq
DB search
MMSLVWLYGKPEGTGVLKQSPADFCVREDLGFEPDGDGEHVLVYVRKTGCNTQFVADNLA
RFAKISGRAVSYAGLKDRHAVTEQWFCLQMPGKETPDFSAFTLEGCQVINVARHRRKLRI
GTLRGNAFSLVLRHISQRDEVESRLQQIQRFGVPNYFGEQRFGRGGNNLLMAQRWANNDI
VVRERNKRSFYLSAARSAMFNHIVSHRIEQALHQQVMGGDAMQLAGRGSWFVAQPEELVT
LQQRLDDGELRITAPLPGDGELGTQEQALEFEQQALVGYDDFLSLIKRERVETARRAALV
IPQQMAWQWQDDSTITVDFWLPAGSFATSVVREVMLTADVEDMPEE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcattagtttggctctatggtaagcctgaagggacgggagtgttgaaacagtct
ccggctgatttctgcgtccgggaagatttaggctttgaaccagatggcgatggtgaacac
gtcttggtctatgtgcgtaaaactggctgtaatacccagtttgtcgccgataacttagcg
cgattcgctaaaatttccggccgtgcagtcagctatgctggcttgaaagaccgtcatgcg
gttacggaacagtggttctgtttacagatgccgggtaaagaaactcccgactttagcgct
tttacgctggaaggctgccaggtgattaacgtcgcccgccatcgtcgaaagctgcgaatt
ggtactttacgcggcaatgcttttagtctggtattacgacatatcagtcagcgtgatgag
gttgagtcgcgcttacaacaaattcaacgttttggtgttcctaactattttggtgaacag
cgctttggccgtggtggtaataatctgctgatggcacagcgttgggccaataatgatatc
gtggtcagagaacgcaataagcgcagtttttatctatcggctgctcgcagcgccatgttt
aatcatattgttagtcacaggattgagcaggcattgcatcaacaagttatgggtggcgat
gccatgcagttggctggcagggggagctggtttgtggctcagccggaagagctggtgact
ttgcaacaacggctggatgatggcgaattacgtattactgcccccctgccgggggacggt
gaactaggcacacaagagcaggcgctggaatttgaacagcaggctttagtcggctatgac
gattttctttcactgataaaacgagagcgggttgaaactgcacgtcgtgcggctttagtg
attcctcagcagatggcatggcaatggcaggatgacagcactataacggtcgatttctgg
ttaccggctgggagttttgctaccagcgtggtgcgggaagtgatgctgacggcggacgtt
gaggatatgcccgaagagtaa
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