Pragia fontium: QQ39_07235
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Entry
QQ39_07235 CDS
T03952
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pfq
Pragia fontium
Brite
KEGG Orthology (KO) [BR:
pfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfq03400
]
QQ39_07235
Enzymes [BR:
pfq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
QQ39_07235
DNA repair and recombination proteins [BR:
pfq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
QQ39_07235
Prokaryotic type
QQ39_07235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AKJ41900
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All DBs
Position
1612648..1614081
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AA seq
477 aa
AA seq
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MATHLVWFRNDLRITDNTALTAACQHPSDRVIALYIATPQQWHQHDMAPVQAGFIYSNLC
TLQQSLAAIGIPLLVLEVNDFGGIAAAITQVCQQHQVDALFYNRQYPLNERRRDQSVELA
LSSSVVCHSFDDALLFPPMSILTGKGEMYQIYTPFRHALINHLQTKLQPVLPAPKQRGGE
VNTTDIPPFNYPVNLHEDFPAGERPALQRLRRFCRENVMDYERYRDIPAQDMTSRLSPYL
AIGVLSVRQCYHRLLAESADFLLQPQSGAFAWFNELAWREFYHHLLVAWPKLSMNKPFIG
WTERIHWNPSHDDFQRWCDGETGYPIVDAAMRQMNHTGWMHNRLRMIVASFLVKDLLIDW
RRGERYFMSRLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGKRFDPQGHFIRQWL
PELGDVPDKWIHTPHQWSEKQGKPIDYPTPIVDHATARIATLVAFEQARKPQAIGED
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccatttggtatggtttagaaatgatttacgcataacggataacaccgcatta
accgctgcctgccagcatccttccgatcgcgttattgcactatatatcgcaacgcctcag
cagtggcatcagcatgatatggcgccggtacaggccgggtttatttactctaatctgtgt
acattgcaacaatcccttgcggcgattggaatccctttgttagttcttgaggtgaatgat
tttggcggtattgcagcagcgataactcaggtatgtcagcaacatcaggttgatgcgctt
ttttataatcgtcagtatccgctgaatgagcgtcggcgagaccagtcagtggaactggca
ttatcttcctcggtggtttgccatagttttgacgatgccttactgtttcccccaatgtct
attttgaccgggaagggggagatgtatcagatttatacgccatttcgccatgccttgatt
aaccatttacaaaccaagctgcaaccggtgctacccgcgccgaaacaacgtgggggggaa
gttaatacgacagatatccccccgtttaattatccagttaatttacatgaagattttcct
gctggtgaacggccagccttgcaacgtctaagacgattttgtcgtgaaaatgtcatggat
tatgaacgttatcgggatattccagcacaggatatgaccagtcgattatcgccctatttg
gccattggcgtgttatcggttcgccagtgttatcaccgtttactcgctgaatctgctgat
ttcctgctgcaaccgcagtctggtgcatttgcctggtttaacgagttggcgtggcgtgag
ttttaccaccatctgttggtggcttggccaaaattatcgatgaataagccttttatcggc
tggaccgagcgtatccattggaaccccagtcacgatgattttcaacgctggtgtgacgga
gaaaccggttatcccatcgtggatgcggcaatgcgtcagatgaatcacaccggctggatg
cataatcggttacggatgattgttgccagttttttagtcaaggatttactgatcgattgg
cgtcgtggagaacgctattttatgtctcgtctgattgacggcgatctggcggcgaataac
ggtggctggcagtgggcggcgtccaccggcaccgatgcggcaccttatttccgcattttt
aacccgaccactcaggggaaaaggtttgacccgcagggacactttatccgtcagtggttg
cccgagttaggcgatgtgccggataaatggatacatactcctcatcaatggtcggagaaa
cagggaaagcctatcgactatccaacaccgatagtcgatcacgccacagccagaatagcg
acattagtggcgtttgagcaggcaagaaaaccgcaggcgataggggaagattaa
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