Pragia fontium: QQ39_08925
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Entry
QQ39_08925 CDS
T03952
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pfq
Pragia fontium
Brite
KEGG Orthology (KO) [BR:
pfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfq03400
]
QQ39_08925
DNA repair and recombination proteins [BR:
pfq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QQ39_08925
Archaeal homologous recombinant proteins
QQ39_08925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
TsaE
AAA_21
ABC_tran
SMC_N
cobW
YwqJ-deaminase
Motif
Other DBs
NCBI-ProteinID:
AKJ42194
UniProt:
A0A0G3CJQ6
LinkDB
All DBs
Position
complement(2025268..2028948)
Genome browser
AA seq
1226 aa
AA seq
DB search
MRILSLRLKNINSLKDEWKIDFTQAPFCDNALFAITGATGAGKTTLLDAICLALYHKTPR
LSPSPTQNELMTHHTAESLAEVEFEVQGIGYRAFWSQRRAKGSAEGNLQTPKVELAYLSD
GKIITDKIRDKLELTSQITGLDFSRFTKSMLLSQGEFAAFLNADPNERAELLEELTGTEI
YGQISEQVFLRHKEARSQLDTLQALLGGVQILSENDRQTLEQQVTQLLIQEKQLNQQSQQ
QLSHKQWLEKRQDYQRIETECRAQLTHAQQQLQQQQPLLDKLQQNEPAEKLRPLYNDRQR
LQQELSQMTGELEKTAQLASSLKQETSLAQANLEQIEQQRATQLKQHQQTRDLINNQIMP
LDVQIESKTREQTQLSTQWESLKQQQTIQQTAVNNGIEQQRVLLTQQDTISQYFSLHSPH
QYWGENLSLWQQQLGQLSRQYPELNVVKQQIAHKHAEIAQLNQQLKEVTSSQAQSQTDLH
HLQQTFDKTDAEYQRMRSQQDLTTLKQQRDSFSQTRDIQQTLIQLNQRYQETHKQYQNAQ
QQLAEITLNIQQLNADLLIKRQQYADKKIHLADLEKLSEQEKLIIRFEQERAQLKPGSPC
PLCGSVQHPLLNQHQSNQPTDTEQRLNQLNTELQVLHDAGIEIKSRITLQTEQHNRLQPE
SDVLQQNQQRIAEQWSQSCQRLSLSFAISDNIQFEAYLEGFRVQEQQLYQQINLLEQAEQ
HWLQQKERLNKQQIVVKEALQRVTLLTQDIAYQSQNSQQLEQTLQNLQNNYQELLALLQT
NLAAYQLPMPEAEQYQQWLTDRKSEWQQWQTYVIHQKEIDQQLSVLNTDITAGKTRLENL
TLQIEQSNTQLTAHSNELKQLKQQRFELFGDQQTEHINQQLQLEQQTLEQTLNQTRNCWQ
QSHNRWVALNGQLSTLHQQQQLKIASVTDVENQFTLALQDSEFSHETAFLTALLSEDERQ
QLTSEKERLLTGLNQAHTLLNEAEKRLQSHVATQPSHLDINIPINELEQQLANLSQESKA
NSIRQGEIRQQLDNDQKNQQNQQSLVTQIEQYQQQLDDWSYLNNLIGSSDGAKFRKFAQG
LTLDHLVYLANQQLNRLHGRYLLQRKENSALELQVVDTWQADNIRDTRTLSGGESFLVSL
ALALALSDLVSHKTSIDSLFLDEGFGTLDAETLDVALDALDNLNASGKIIGVISHIDAMK
ERIPVQIRVKKVNGLGISRLDEQFRH
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgagaattctcagcctgcgcctgaaaaacattaactcgctgaaagatgaatggaaaatc
gactttacccaagcgccgttctgcgacaatgccctgtttgctattaccggcgccaccggt
gcagggaaaaccaccctgttggatgccatttgtctggcgctgtatcataaaacgccgcgc
cttagccccagcccgacccaaaatgaattaatgacccaccatactgccgaatcactggca
gaagtagaatttgaagtccaagggattggctatcgtgcgttttggagtcaacgtcgagcc
aaaggcagcgccgaaggtaacttacaaacgccgaaggtggaactggcctatttaagcgat
ggtaagattattaccgataaaattcgcgataagcttgagctaacctctcagattaccggt
ctggactttagccggttcacaaaatccatgttgctatcgcagggcgaatttgcagctttt
ctcaatgccgatcctaatgagcgagctgaattactggaagagctcaccggcacagaaatt
tacggtcagatttcagaacaggtcttcctacgccataaagaggccagaagccagttagat
actctgcaagcattgctgggcggagttcaaatcttatcagaaaacgaccgtcaaacgttg
gagcaacaggttacccagctattgatacaggaaaaacagctcaatcaacaatctcaacag
caacttagtcacaaacagtggctggagaaacgacaagactaccaacgtattgaaactgaa
tgccgggctcaattaacccacgctcaacaacaattacaacagcaacaaccgttactggat
aagttgcaacaaaatgaaccagcagagaagctacggccactttacaacgatcgacaacgg
ttacagcaagaattaagtcagatgaccggcgaactggaaaaaaccgctcagctagcgtca
tctctcaagcaagaaaccagtctggctcaagccaatttggaacaaatagaacaacaacga
gccacacaattaaaacagcatcaacaaacccgtgacctgataaataaccaaattatgccc
ctcgatgtacagatcgagagcaaaactcgcgaacaaactcaactcagtacacaatgggaa
agtttaaaacagcaacaaactatccaacaaacagccgtcaataacggtattgagcagcag
cgagtattacttacccaacaagacacgattagccaatatttttcgcttcactcgccacat
cagtattggggagagaatttatccctatggcagcaacaacttggtcagcttagccgacaa
tatcccgagttaaacgttgtaaaacagcaaatagcgcataaacatgctgagattgcacag
cttaatcagcagctgaaagaagtgacatcgtcacaagcccagagccaaaccgatctacat
cacttacagcaaacttttgacaagaccgacgctgagtaccagcgcatgcgatcacagcaa
gatttaaccactctgaagcaacagcgcgatagtttcagccaaactcgagatattcaacaa
acgttaattcaattgaatcaacgttatcaggaaacccataaacagtatcaaaacgcacag
cagcagctggctgaaatcacacttaatatacagcagcttaatgcagatttactgattaaa
cgccagcaatatgccgataagaaaatccatctggcggatctggaaaaattatcagaacag
gaaaaattaattatccgttttgaacaagaaagagcccagttaaaacccggctccccttgc
ccgctatgtggttcagtgcaacaccctttgcttaaccaacatcaatccaatcaaccaacg
gatactgaacagcggttaaatcagttaaacactgaactacaggtactgcatgatgcaggt
attgagataaaaagccggatcaccctgcaaacagagcagcacaatcgacttcaaccagaa
tcggatgtattacaacaaaatcaacagcgaatagcagagcaatggtctcaatcctgtcaa
cggctatccctaagttttgccattagcgacaatatacagtttgaagcttatctggaaggt
tttcgtgttcaggaacagcagctttatcagcaaattaatctgctggaacaggctgaacag
cattggttacagcaaaaagaacgacttaataagcagcaaatagtggttaaagaagcccta
cagcgcgtgaccttactgacacaagatattgcttatcaaagtcagaacagtcagcaatta
gagcaaacgctgcaaaacttgcagaataactatcaggagctgctagccctgctgcaaacc
aatcttgctgcataccaactccccatgcctgaagccgaacagtatcaacagtggttaact
gaccggaaatccgaatggcagcagtggcaaacctatgtcattcatcaaaaagagattgac
caacagctgtccgtacttaataccgatatcactgcgggaaaaacccggctggaaaatctt
actctacagattgaacaaagtaatacccagctaactgcccatagcaatgaactcaaacag
ttaaaacagcagcggttcgaactctttggtgatcaacagactgaacatattaaccagcag
cttcagctggaacagcagacccttgaacaaacgctgaatcaaaccagaaattgctggcaa
cagtctcataatcggtgggttgctctgaatgggcagctatcaactctccatcaacagcaa
cagttgaaaatagcgtcggtgactgatgtagaaaaccaatttacgctggcattacaagac
agtgaatttagccatgaaaccgccttcctgacggctttactgtctgaagatgaacgccaa
cagcttaccagcgaaaaagaacgattgctgacgggtttaaatcaggcgcataccttattg
aatgaagcagagaaacggctacagtcgcatgtggcaactcaaccttcacatctggatatt
aacatccccattaatgagctcgagcagcagttagccaatctgtcgcaggaaagcaaagcc
aacagcatacgccagggtgaaattcgccaacagttagacaatgaccagaaaaatcagcaa
aatcaacaatctttggttacacaaattgagcaatatcagcagcagcttgatgattggtct
tacttgaataatctcatcggttccagtgatggggcaaaatttcgtaagtttgcccaaggt
ctcactcttgatcatctggtctatctggctaaccaacagcttaaccggctgcatggccgc
tatttgttacagcgtaaagagaatagcgcgctggagttacaggtggttgatacctggcaa
gctgataatatacgcgatacccgcaccctttccggtggcgaaagttttctggtgagtctg
gctttggcgctggcgctatcagatttagtgagccataaaaccagtattgactcactgttc
ctggatgaaggatttggtacgctggacgcagaaacgctggatgtggcacttgatgcactg
gataacctgaacgccagtggtaaaattatcggggtaatcagccatattgatgccatgaaa
gaacgcattccggtgcaaatcagggttaaaaaggtgaatggcttgggcatcagcaggtta
gatgagcagttcagacattaa
DBGET
integrated database retrieval system
