Pragia fontium: QQ39_10090
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Entry
QQ39_10090 CDS
T03952
Symbol
ruvB
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pfq
Pragia fontium
Pathway
pfq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QQ39_10090 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfq03400
]
QQ39_10090 (ruvB)
Enzymes [BR:
pfq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QQ39_10090 (ruvB)
DNA repair and recombination proteins [BR:
pfq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QQ39_10090 (ruvB)
RecFOR pathway proteins
QQ39_10090 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_3
TIP49
AAA_16
AAA_14
Rad17
nSTAND3
AAA_2
AAA_18
RNA_helicase
AAA_17
NTPase_1
NB-ARC
AAA_28
Bac_DnaA
AAA_33
AAA_24
ABC_tran
TsaE
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AKJ42396
LinkDB
All DBs
Position
complement(2285668..2286678)
Genome browser
AA seq
336 aa
AA seq
DB search
MIEADRLISPVAQFEEEDSIDRAMRPKLLNEYVGQPHVREQMEIFIQAAKLRGDALDHLL
IFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLS
PVVEEILYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQ
RLEFYQVKDLESIVSRSAQCMSLNLSDEGANHIARRARGTPRIANRLLRRVRDFAEVRAD
GVINADVATRALDMLDVDVEGFDFMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIED
VIEPYLIQQGFIQRTPRGRMATQHAYRHFGISRDRD
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagctgaccgtttgatatcacctgttgcgcagtttgaggaggaagactccatc
gatcgcgctatgcgccctaagctactgaatgaatatgtcggccagcctcacgtacgtgag
caaatggagatttttattcaggcggcaaagttgcgtggtgatgcactggatcatctcctg
atttttggtccgccggggctggggaaaaccacgttagctaacattgttgctaacgagatg
ggggttaacctacgaaccacttccgggccggtattagagaaggccggggatttggcggcg
atgttgaccaatctggagcctcatgatgtgttgtttatcgatgagattcatcggctgtca
ccggtggttgaagagattctctatccggcgatggaagattatcaattggatatcatgatc
ggtgaaggccccgcggcacgttcaatcaaaattgatttgcctcccttcacattaatcggc
gcgaccacccgcgctgggtcactgacttcaccgctgcgtgaccgttttggcattgtgcag
cgtttggagttttatcaggttaaagatctggaatctattgtttcacgcagcgcccagtgt
atgtcgctcaatctgtccgacgaaggggccaatcatattgcccgtcgcgcacgggggacg
ccgcgtattgctaaccgcttactgcgccgggtacgcgactttgctgaagtgcgcgctgat
ggcgtaattaatgcagacgttgcgaccagagcgttggatatgctggatgtggacgttgaa
ggtttcgactttatggaccgtaagctgctgttggcgattattgacaagtttatgggtggg
ccggtcggattagataatttggcagccgcaattggtgaagaacgtgaaaccatcgaagat
gtgattgaaccttatctgattcagcaggggtttattcagcgtacgccgagagggcggatg
gcgactcagcacgcttatcgacactttggtatttcaagagatcgcgactaa
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