Pragia fontium: QQ39_11445
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Entry
QQ39_11445 CDS
T03952
Name
(GenBank) ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pfq
Pragia fontium
Brite
KEGG Orthology (KO) [BR:
pfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfq03009
]
QQ39_11445
Ribosome biogenesis [BR:
pfq03009
]
Prokaryotic type
ribosomal protein modification factors
QQ39_11445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AKJ42622
LinkDB
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Position
2618767..2620530
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AA seq
587 aa
AA seq
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MQTTKQTFIPGKDAALEDSISRFQQKLTQLGFNIEEASWLNPIPNVWSVHIRDKDCPLCF
TNGKGATKKAALASALGEYFERLSTNYFFADFYLGKNIAESEFVHYPNEKWFPLPSDNSL
PTGILDEQLHQFYDPDQSLAASDLVDLQSGNGQRGICALPFVRQSDLETVYIPMNIIGNL
YVSNGMSAGNNRDEARVQALSEIFERFVKNRIIAEAISLPEIPNEVINRYPPVTEAIEKL
EAEGFPIYAYDASLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSL
KDLDVFNAPTFDNEEVAEYTNLETHFIDSSGLISWDLFKQQPDYPFADWNFSGTSEQEFV
TLMQIFRQQQTDVYIADYCHLGVDACRIIAPGMSEIYPAEDLLMANNNMGQHLRDTILSL
PSSQWEPEAYLALIEQLDQEGLDDFIRIRELLGIATGSNNVWSSLRIGELKSMLALAGGD
LDQALSWVEWTQEFNASLFTEERRNYYRCLQTLLLMVLDAEDREPEQFNPAFNRMYGAET
VTTVWKNIHGEQRFYGLIDVDQDLTVLPAHQSLLHAYNKLQTAKRLA
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaaccaagcaaacttttattcccggtaaagatgcggccctggaagactccatc
tcccgttttcaacaaaagctcactcaattaggatttaatattgaagaggcttcctggctt
aatcctatccccaatgtttggtcggtacacattcgcgataaggattgccctctgtgtttt
actaatggcaaaggcgcaaccaagaaagccgctctggcctcagctttgggtgagtatttc
gagcggttatcaaccaactatttctttgctgacttctatttgggtaaaaacattgccgag
agcgaatttgttcattatcccaatgagaagtggtttcccctgccatcagataacagcctg
cctacgggtattctggatgaacaactacatcaattttacgatccagaccagagtttagcc
gcaagcgacttggttgatttacagtcaggcaatggtcaacgcggtatttgtgccctaccg
tttgtccgtcagtcggatcttgaaacggtttatattccgatgaatattattggcaacctg
tacgtttctaacggtatgtcggccggtaataatcgcgatgaagccagagttcaagcgctg
tcagaaatttttgaacgctttgtaaaaaaccggattattgccgaagccatcagcctgccg
gaaattcctaatgaagtcatcaatcgttatcctccggtaaccgaagccatcgaaaagctg
gaagcagaaggctttcctatctatgcctatgatgcatcattagggggacaatatccggtg
atctgtgtggtgctctttaatccggctaacggtacctgttttgcctcattcggcgcacac
ccagactttggtgttgcactggaacgtacggtgactgaactcttacagggtcgtagtctg
aaagatctggatgtgttcaatgcccctacttttgataatgaagaagtcgctgaatacacc
aatctggaaacacactttatcgattccagcggtttaatctcgtgggatctgtttaagcaa
cagccagactatccatttgcagattggaatttcagcggaacctctgaacaagaatttgtt
acgttgatgcaaattttccgccagcaacaaaccgacgtgtatattgcagattattgtcac
cttggcgttgatgcttgccgtattattgctccgggcatgtccgaaatctatccggcagaa
gatctgttgatggccaataacaatatgggccagcatttaagggataccattcttagccta
ccttccagccaatgggaacccgaagcttatctggccttgattgaacaattggatcaggaa
ggcctggatgactttattcgcatcagagaactgttaggtatcgccacggggtctaataac
gtctggagcagtttacgtattggtgaattgaaatctatgctggctctggccggtggcgat
ctggatcaggccctaagctgggtggaatggacgcaggagttcaatgcctctttatttact
gaagaacgccgtaattattatcgctgcctgcaaaccctactgttgatggtgttggatgct
gaagaccgggaacctgaacaattcaatccagcgttcaatcgtatgtacggggcagaaacc
gttacaacggtttggaaaaacattcatggagaacagcgcttttacgggcttattgatgtg
gatcaagatttaacggttcttcctgctcatcaatcattgttgcatgcttataataaatta
cagacggctaaacggctggcttag
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