Pragia fontium: QQ39_12815
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Entry
QQ39_12815 CDS
T03952
Name
(GenBank) transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
pfq
Pragia fontium
Brite
KEGG Orthology (KO) [BR:
pfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfq03000
]
QQ39_12815
Transcription factors [BR:
pfq03000
]
Prokaryotic type
Other transcription factors
Others
QQ39_12815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_16
AAA_22
NACHT
MCM
DUF6213
AAA_33
ATPase_2
AAA_19
AAA_7
BrxC_BrxD
AAA_30
ABC_tran
AAA_14
Methyltransf_32
T2SSE
AAA_2
IstB_IS21
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AKJ42842
LinkDB
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Position
2938966..2940564
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AA seq
532 aa
AA seq
DB search
MKRVAIGVLGTVLDKRGKRENRWNKWRPTIGLCQQADLPLDRLELLHQPRDRGMAEQVAE
DIQQTSPQTEVKLTPITLHNPWDIEEVYTTLLDFAEHYPFDPDNEEYLVHITTGTHVVQI
CWFLLTEARYLPAKLVQTMPDRESGRGENPVNPAGGYSIIDLDLSRYDQISTRFQQIKEQ
SLSYLKAGIATRNATFNKLIEEIERVAVRSTAPILMIGPTGAGKSFLARRIYELKLERHQ
INGRFVEVNCATLRGDSAMSTLFGHVKGSFTGAQTDRSGLLRTADGGMLFLDEIGELGLD
EQAMLLKAIEEKKFFPFGSDKEVQSHFQLIAGTHRNLRKQVSEGLFREDLYARINLWTYK
LPGLAQRSEDIGPNLDYELARFAREHGEQTRFNTESRRKYLTFATSSDALWSGNFRELGA
SITRMATLAESGRITDTVVCDEIKRLQDGWGYTTKEIALPEIEQPIDLFDYYQLKAVIEV
CKTSVSLSEAGRKLFAVSRQQKQNPNDADRLRKYLARFDLNWEQLKQMMAEK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagtagcaattggcgtattagggacggtactggataaacgtggcaaacgtgaa
aatcgctggaataagtggcgcccaactatcggtttatgtcagcaagcagatttgcctctg
gacagattagaactgctccaccagcctagagatcgtggtatggctgagcaagtcgccgaa
gatattcaacaaacctcaccacaaaccgaagttaagctaacgccaatcacgctacacaat
ccttgggatattgaagaggtctataccactctgttggattttgccgagcactatcccttc
gatccagacaatgaagaatatttggtgcatatcaccaccggtactcacgttgtccagata
tgctggttcttgctaacggaggcgcgctatcttccggctaaactggtgcaaacaatgccg
gatagagagtccggcaggggagaaaacccggtcaatcctgccggaggatattccatcatc
gatctggatttgagccgctacgatcagatttcaacccggtttcaacaaataaaagaacag
tctctgtcgtacctgaaggcgggaattgcgactcgaaatgccacttttaataaattaatt
gaagagatagaacgcgtagccgttcgttctactgcaccaattctgatgattggcccaacg
ggagcaggtaaatcttttctggctcgtcggatttatgaactaaagctggaaagacaccaa
atcaatggccgctttgttgaagttaactgcgctactttgcgcggcgatagcgctatgtcc
actctgtttggtcatgttaagggctcatttaccggagcacaaaccgatcgttctggtctg
ctacgaaccgccgatggaggaatgctatttctggatgaaataggcgaattaggattggat
gagcaagcgatgctactgaaagccattgaagagaaaaaattctttccattcggtagtgac
aaagaagtacagagccacttccaacttatcgctggtactcatcggaacttgcgtaaacag
gtaagtgaaggtttatttcgtgaagacctgtatgctcgaatcaatttgtggacttataaa
ttgccggggcttgcccaacgtagtgaagatattggacccaatctggattatgaattagca
cgctttgcccgagaacatggggaacaaacccgttttaataccgagtcgcgtcgtaaatat
ctgacgtttgccacctcaagcgacgctctctggtcaggcaacttccgcgaactaggtgca
tcaataacccgcatggcaacgctggcagaatcaggaagaattactgacaccgtggtgtgc
gatgaaataaaacgtctacaagatggctggggatataccacaaaagaaatagccctacct
gagatagaacagccaatagacttatttgattactaccaactaaaagcagtcattgaagta
tgtaaaactagcgttagcttatcagaagccggcagaaaactgtttgcggtttcccgccaa
cagaaacaaaatcccaacgatgccgatagattaagaaaatatctggcacgttttgattta
aattgggaacagctaaagcaaatgatggcggaaaaatag
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