Pragia fontium: QQ39_13420
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Entry
QQ39_13420 CDS
T03952
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pfq
Pragia fontium
Pathway
pfq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QQ39_13420 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfq03019
]
QQ39_13420 (pcnB)
Enzymes [BR:
pfq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
QQ39_13420 (pcnB)
Messenger RNA biogenesis [BR:
pfq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
QQ39_13420 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AKJ42941
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All DBs
Position
3062685..3063986
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AA seq
433 aa
AA seq
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MVIIPRAQHTISRQDISDNALKVLYRLNKSGYEAYLVGGGVRDLLLNKKPKDFDITTNAT
PEQIRKLFRNCRLIGRRFRLAHIMFGPEIIEVATFRGGHSDNNDKDASQQANNGMLLRDN
VYGSITEDANRRDFTINSLYYSASDFTLRDFTGGLQDLQQGVIRLIGDPEVRYREDPVRM
LRAVRFAAKLDMKIEPATAAPIVHLAHLLNEIPPARLFEEALKLLQSGYGYATYQQLREH
HLFESLFPIIYRNFTPQGDGNMEQILNQVLKNTDNRLQNGKRVNPAFLFAAMLWYPLVEH
AQKLAQESGLVYYDAFALAMNDILDEQCRTLSIPKRITALVRDIWQLQLRLPRRQGKKAY
KLMEHPKFRAAFDLLQLRADIEKGELQKLSHWWDEFQQADMQRQKSMLNSLDDEPSRHRR
TRRPRKHTPKPQQ
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
gtggtgattattccgcgtgcacagcacactatttcacgtcaggacattagcgataatgcc
ctgaaggtactttatcgtctcaataaatctggctatgaagcctatctggttggcggcggt
gtccgcgatctactgttgaataaaaagccgaaagacttcgatatcaccaccaatgccacg
ccggagcaaatacgtaagctatttcgcaactgccgtctgatcggtaggcgttttcgtctg
gcccatattatgtttggcccagaaattattgaagtcgccacattccgcggcggccacagc
gataataacgataaagacgcttctcagcaggccaataatggcatgctattacgcgataat
gtttatggttcaattaccgaagatgctaatcgtcgggactttaccatcaatagcttatat
tacagcgccagcgactttaccttacgcgactttaccggtggcctgcaagatttacagcag
ggcgttatccgcttaatcggcgatcctgaagttcgctatcgcgaagacccggttagaatg
ctccgcgctgttcgctttgccgccaaactggatatgaagattgaacccgctaccgcagca
ccgattgttcatctggcgcatctactcaacgaaattccgccagcaagactgtttgaagaa
gccttaaaactgctacagtcaggatatggctatgcgacctatcaacaactgcgcgagcat
cacctgtttgagtcattgttcccgattatttataggaactttacccctcagggtgatggc
aatatggagcagatccttaatcaggtactgaaaaataccgataaccgtctgcaaaacggt
aagcgagttaatccggctttcctgtttgccgccatgttgtggtatccgctggtagagcac
gcgcaaaaactggctcaagagagtggtttagtctattacgatgcctttgctctggcgatg
aatgatattctggacgaacagtgccgtacgctgtctatccctaaacgaattaccgcatta
gttcgtgatatctggcagctgcagttacgcctacctcgccgtcaaggtaagaaggcttat
aagctgatggagcatcctaagttccgggcggccttcgatctgttacaactacgggctgat
atcgaaaaaggcgaattacagaagctgagccactggtgggatgagttccaacaggccgat
atgcagcgtcaaaaatccatgctgaactcgctggatgatgaaccgagccgccaccgtaga
acccgtcggccaagaaagcatacgccgaaaccacagcaatag
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