Pragia fontium: QQ39_14230
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Entry
QQ39_14230 CDS
T03952
Symbol
recC
Name
(GenBank) exonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pfq
Pragia fontium
Pathway
pfq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QQ39_14230 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfq03400
]
QQ39_14230 (recC)
Enzymes [BR:
pfq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QQ39_14230 (recC)
DNA repair and recombination proteins [BR:
pfq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QQ39_14230 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
RMI1_N_N
Motif
Other DBs
NCBI-ProteinID:
AKJ43079
LinkDB
All DBs
Position
complement(3243374..3246754)
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AA seq
1126 aa
AA seq
DB search
MFTVYHSNQLDLLKTLTTALIAGKPLANPFEAEIILVQSHGMAQWLQIELASELGIAANI
EFPLPASFIWQMFTKVLPGIPQESAFSKDAMTWKLMWLLPPMLGLPEFAALSGYLSDDEN
MRKRHQLAGRIADLFDQYLVYRPEWLRRWEQHELVDGLDESQVWQAPLWRALIDYTEELQ
QPGWHRANLYQRFIDALNRPDFSPAELPSRVFICGISALPPVYLQALQALGQHIDIHLMF
TNPCRYYWGDIQDYAFLAKLQARKRRQVENGHDVALFRQPEGADKLFDELGNQQLSNPLL
ASWGKLGRDNLYLLAQLDKMQEVDAFVDMEQDSLLHRIQHDILQLDDRALIVNSPDSPLD
SRDKQPLDPQDRSISTHVCHSAQREVEVLYDRLLAMLDDDPTLTLRDIIVMVADIDNYTP
YIEAVFGNAPPERYLPYAISDRSASQAHPVLTAFLSLLDLPESRFTAEDILTLLEVPALA
MRFQIDEDGLRILRQWVEDAGVRWGLDDDMVSDLGLPPTGQHTWRFGLTRMLLGYAMDSQ
SGDYQGILPYDESSGLIAVLAGQLSELLMQLSIWRQRLMESHTLTEWLPFCRELIDAFFV
TDLETEPVLALIEQQWQKQIGFGLNANYIDEVPLTVLKDELAARLDSERISQRFLAGSIN
FCTLMPMRSIPFKVVCLLGMNDGIYPRTLPPLGFDLMAAKPVKGDRSRRDDDRYLFLEAL
LSAQQKLYISFIGQSIQDNSQRYPSVLVTELLEYIAQSHVLPGDESSDLEQSAAAVYQQL
LCYHPRVPFSEQNFVNGSEQQSYASEWLPAAGRQGIAHGEFSAMLEPLTLNRIELDDIRR
FYRHPVRAFFQQRLNVSFSMDETELPDEEPFLVENLQRYQLNMLLLNRLIEDQDPLELYS
RSRAAGELPFGAFGELFWQGQTEEMTQLAERVKQHKLPSQSVEVEISIDDIDVSGWLHQV
QPDGLLRWRPAKLTVLDGISLWLDHLIYCISGGQGESRMYGRDGSEWRFAWLPVDEAKKH
FSFWLQGYIHGLSSPLLLLPKSAWAWLESCYDATTAQICWDEASQQKARQKLIQAWQGSP
QLRGEGDDPYLMRLFRLMDDPRYQQIITDSEPYLLVLMQQRLEKSA
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgtttacggtttaccattccaatcagcttgatctgctgaaaacgctgaccaccgcgttg
attgcgggtaaaccgttagccaatccttttgaagcagaaattattttggtgcaaagccac
ggcatggcgcaatggctacagattgaactcgcctctgagttgggtatcgcagccaatatt
gagtttccattaccggcttcgtttatctggcagatgtttaccaaagtgctaccgggtatt
ccacaggaaagcgcctttagcaaagatgccatgacctggaagctaatgtggctgctgcct
cctatgctagggttacctgagttcgctgcgttgtcaggctatttgagtgatgatgagaac
atgcgcaagcgccatcagctggccggacggattgctgacctgtttgaccagtatttggtg
tatcgaccagaatggctgcgacgctgggagcagcatgaattagtcgatgggttggatgaa
tctcaggtttggcaagcaccgctctggcgtgcactgattgattatactgaagaactacag
cagccgggctggcaccgggcaaacctttaccagcgttttattgatgcattgaatcggcct
gatttctcgcctgctgagcttccttcccgggtatttatctgtggcatatcggcgctaccg
ccagtctatttgcaggcgctacaggcgttagggcagcatattgatattcacctgatgttt
accaatccttgtcgttactattggggagatattcaggattacgcttttctggctaagctt
caggcgcgcaaacgtcgtcaggtagaaaacggccatgacgttgcgctatttcgtcagcct
gagggtgccgataagctgtttgatgagttgggtaatcagcagctaagtaacccgctgctg
gccagttggggaaagctggggcgggacaatctgtatttgctggctcagctggataaaatg
caggaagtggatgcttttgttgatatggaacaagatagcctgctccatcgtattcaacac
gatatcctacagcttgatgatcgcgcgctgattgtgaacagccccgactcaccgttagac
agtcgggataagcagccgctggatcctcaggatcgttccatcagtactcatgtttgccat
agcgcccagcgtgaagttgaagtgctttacgatcggctattggcgatgttggatgatgat
cctaccttaaccctgcgcgatattattgtcatggtggcagatatcgacaactatactccc
tatattgaagcggtatttggtaatgctccgccagagcgctatttgccctatgctatttct
gaccgcagcgccagtcaggctcacccggttttaaccgcatttttatccctgttagattta
ccggaaagccgcttcactgcggaggatatcctgacgctattggaagtgccggctttagcc
atgcgttttcagatcgatgaggatggactacgaattttgcggcagtgggttgaagatgcc
ggcgttcgctggggattagatgatgatatggtcagcgatcttgggctaccgcctaccggc
cagcatacctggcggtttggcctgactcgtatgttgttgggctatgccatggatagccag
agcggtgattatcagggaatactgccttatgatgaatccagcgggttgattgcggtattg
gccggtcaactgtctgagctgttaatgcaactctccatttggcgtcaacgcctgatggag
tctcacaccttgaccgagtggttaccgttttgtcgtgagttaatcgacgccttcttcgtc
accgatttggagactgaaccggtgctggcgctaatcgagcagcagtggcagaagcaaatt
ggcttcggtcttaacgccaattatattgatgaagtgccgttaacggtgttgaaagatgaa
ctggctgcccgactggatagtgaacgaatcagtcagcgttttttagcgggttcaatcaat
ttttgtacgctgatgcccatgcgttcaattccgtttaaagtggtgtgcctgctgggcatg
aatgatggcatttatcctcgtacactgccgccgctcggctttgacttgatggccgctaag
ccagtaaaaggcgatcgcagccggcgggatgatgaccgttacctgtttctggaagccctg
ttatcagcacagcagaagttatacatcagctttattggtcagtcgattcaggacaatagc
cagcgatatccgtcggtattggtgacggaattgctggagtacattgcacaaagtcacgtg
ttacccggtgatgaatccagtgatttggagcaaagcgctgccgccgtgtatcaacaatta
ttgtgttatcaccctcgggtacccttcagtgagcagaattttgttaacggcagtgaacag
cagagttatgccagcgaatggttgccggcagcagggcgtcaagggatcgcccatggagag
tttagcgccatgttggaaccgctgacgctgaaccgaattgaactggatgacattcgacgt
ttttatcgccatccggtgcgggcgtttttccagcagcgtttaaacgttagtttctccatg
gatgaaactgaactacccgatgaagaaccgtttctggtggaaaatctgcagcgttatcaa
ctgaatatgctgttgcttaatcgtttgattgaagatcaggacccgcttgagctctatagc
cgatctcgcgcagcgggtgaactaccgtttggtgcttttggcgaactgttttggcaaggg
caaaccgaggaaatgactcagttagctgagcgagtgaaacaacataaactgccttctcaa
agcgttgaggttgaaatatcgattgatgatatcgacgtgagcggctggctgcatcaggtt
cagccagatggcctgctgcgctggcgtccggctaaattaacggtgcttgatggcatcagt
ttatggttggatcatttgatctattgtatcagcgggggtcagggtgaaagtcgaatgtat
gggcgagacggctctgaatggcgttttgcctggttacctgttgatgaagccaagaaacat
ttttcattttggctacagggatatattcacggtttaagctcaccattgttactattacca
aaaagcgcatgggcctggctggaaagttgctatgatgcgacgacagcccaaatttgttgg
gatgaagccagccaacagaaagccagacaaaagctgattcaggcatggcaagggagtcct
cagctccgtggagaaggtgatgacccttatcttatgcggctctttcggctgatggacgac
ccgcgttatcagcaaattattaccgatagtgaaccttatttattggttctgatgcagcag
cggttggaaaaatctgcttaa
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