Pragia fontium: QQ39_17590
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Entry
QQ39_17590 CDS
T03952
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pfq
Pragia fontium
Pathway
pfq03420
Nucleotide excision repair
pfq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QQ39_17590 (uvrD)
03430 Mismatch repair
QQ39_17590 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfq03400
]
QQ39_17590 (uvrD)
Enzymes [BR:
pfq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QQ39_17590 (uvrD)
DNA repair and recombination proteins [BR:
pfq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QQ39_17590 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
QQ39_17590 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
AKJ43641
LinkDB
All DBs
Position
complement(4027261..4029423)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAASRTNMLVLAGAGSGKTRVLVHRIAWLLSVEHCSPYSIMAV
TFTNKAAAEMRHRIEQLIGTSQGGMWIGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQH
RLLKRIVRALNLDEKQWVPRQAMWYINNKKDDGLRPQHIDTYGNPTEGTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLHKPQILNHYRERFTNILVDEFQDTNRIQYAWIRMLAGDT
SKVMIVGDDDQSIYGWRGAQVENIQRFLDDFPGAVTVRLEQNYRSTSNILKAANALIANN
DGRLGKELWTDGEQGEPISLYCAFNELDEARFVVNRIKTFQDGGGALNDCAILYRSNAQS
RVLEEALLQASTPYRIYGGMRFFERQEIKDSLAYLRLISNPNDDAAFERVVNTPTRGIGD
RSLDVIRHAARDRQVTLWQASVALLQEKVFAGRAAGAIQRFIELIEALTNETGELPLHVQ
TDRVIRDSGLRQMYEQEKGEKGQTRVENLEELVTATRQFSFQDEDMDLSPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFLQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFVGELPEDCIEEVRLRASVSRPVSHSRMG
TPISQNDSGYKLGQRVNHPKFGEGTIINLEGSGEHARLQIAFQGEGIKWLVASYARLEVL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcctacctgctagacagtttaaatgacaaacagcgcgaagccgttgcggct
tcccgtaccaatatgctggtgcttgccggtgcgggcagtgggaaaactcgagtattagta
catcgtattgcctggctgctatcggttgagcactgttctccttattccattatggcggtg
acgtttaccaataaggccgctgcggagatgcgtcatcgtattgaacagctgattggtacc
agccaagggggaatgtggattgggacgttccatggtctggctcatcgcttgctgcgggct
catcatcttgatgccaatctaccgcaggattttcagattctggacagtgaagatcagcac
cgcttgcttaagcgtatcgttcgggcgctgaatctggacgagaaacagtgggttcctcgt
caggccatgtggtatatcaacaataaaaaagacgatggcctgcgacctcagcacattgat
acttacggcaacccgacggaaggtacttggttacgcatttatcaggcctatcaggaagcc
tgcgatcgtgccggtttggtagactttgccgaattactgctgcgagcccatgaactgtgg
ctgcataaacctcagatactcaaccattatcgggagcgtttcaccaatattctggtggac
gaattccaggatactaaccgcatccaatatgcctggatccgcatgttagccggagacact
tccaaagtgatgatcgtaggtgatgacgatcagtcaatttatggctggcgcggtgctcag
gtagagaatattcagcgttttctggatgattttcccggtgctgttaccgtccgtttggaa
cagaactaccgttcaaccagtaatatactgaaggcggctaacgcgctaatagccaataat
gacggtcgattagggaaagaactctggactgatggtgagcagggcgaacctatttctttg
tactgtgcgtttaatgagttggatgaagcccgttttgtggttaatcggattaagactttt
caggatggcggcggtgctttaaatgattgcgcgatcctctaccgtagcaacgcacagtcg
cgggtgctggaagaagcgttattgcaggcttcaacgccttatcgtatttatggcggtatg
cgcttcttcgagcgacaggaaatcaaagattcgctggcttatttacgtttaatctccaat
cccaatgatgatgcggcttttgagcgcgtagtaaatacgccaacccgcggcattggcgat
cggtctcttgacgttatccgtcatgcggctcgcgatcgtcaggttaccctatggcaggct
tcggttgcattattgcaggagaaagtgtttgcgggccgggctgccggggcaattcagcga
tttattgaactgattgaagcgttaactaatgaaaccggtgaattgcctctgcatgttcag
accgatcgagtgattcgagattctggtctgcgtcagatgtatgagcaggagaagggcgag
aaaggccaaactcgggtcgaaaacctggaggaactggtaacggcaacccgtcagttcagt
tttcaggacgaagatatggatctgtcgccgttacaggcattcctctcccatgctgcgctg
gaagcaggagaaggtcaggcggatgcctatcaggatgcggttcagctcatgacattacac
tcggctaaagggctggagtttctacaggtgtttattgtcggtatggaagaggggatgttc
ccaagtcagatgtcgctggatgaaggcggccgactggaagaggaacgccgtctggcctat
gttggggtaacccgggcaatgcagaagctaacgctgacttacgcggaaactcgccgtctg
tacgggaaagaggtttatcaccgcccatcgcgctttgttggtgaactgccggaagactgt
attgaagaagtccgtctgcgtgccagtgtgtcgcgtccggttagccatagcagaatgggc
acaccaatcagccagaatgatagtggctataagctagggcagcgggttaaccatcctaaa
tttggtgaaggcacaattattaatctggaaggcagcggtgaacatgctcgtctgcaaatt
gcttttcagggtgaaggcattaagtggctggtggcgtcatacgcccgactggaagtgctg
tag
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