Pragia fontium: QQ39_17615
Help
Entry
QQ39_17615 CDS
T03952
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pfq
Pragia fontium
Pathway
pfq00300
Lysine biosynthesis
pfq00470
D-Amino acid metabolism
pfq01100
Metabolic pathways
pfq01110
Biosynthesis of secondary metabolites
pfq01120
Microbial metabolism in diverse environments
pfq01230
Biosynthesis of amino acids
Module
pfq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
pfq_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QQ39_17615
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QQ39_17615
Enzymes [BR:
pfq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
QQ39_17615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AKJ43646
LinkDB
All DBs
Position
complement(4032763..4034013)
Genome browser
AA seq
416 aa
AA seq
DB search
MDYFNYKDGQLYAENMPVAELAARFGTPLYIYSRATIERHWHAFDNALSNHPHLICYATK
ANSNLAFLNILARLGSGFDIVSQGELERVLAAGGDPAKVIFSGVAKTEGEMRRALEVGIR
CFNVESIPELHRLNSVAGDMGLKAPISLRINPDVDAKTHPYISTGLKENKFGISYQMARE
AYRLASTMENINIQGVDCHIGSQLTELSPFLDAADRMLVLLDQLAEDGITIHHLDLGGGL
GVRYDDETPPEPMEYATALLEKLKGRENLELCFEPGRAIAANAGIMVTQVEYLKDQDDHH
FAIVDAGMNDLIRPSLYEAWMKIIPVIENGAGQRQVYDVVGPVCETGDFLGKKRELSLNQ
GDLLAVRSAGAYGFSMSSNYNTRCRAAEVMVDGDQAYLVRERERFEDLWRGEHLVK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggattactttaattacaaagatgggcagttatacgctgaaaatatgccggtagctgaa
ttagcagcgcgcttcggaacaccgctttatatttattccagagccacgattgagcggcac
tggcatgcatttgacaatgctttgtctaaccacccacatctaatttgttatgctactaag
gcaaatagtaatctggcttttttaaatattctggctcgtttaggttccggtttcgatatc
gtttctcagggcgagctggaacgagtactggctgccggtggcgatcccgcgaaagttatt
ttctctggggtggcaaaaaccgaaggggaaatgcgccgggcgctggaagtagggattcgc
tgttttaacgtggaatcgatccccgaattacaccgcttgaatagtgtggctggtgatatg
gggcttaaggcgccgatttctctgcggattaacccagacgttgatgccaaaactcacccg
tatatttccaccggtctgaaagaaaacaagtttggtattagctatcagatggctcgtgaa
gcttaccgcttggcgagtactatggaaaatatcaatatacaaggcgtagactgtcatatc
ggttcacaattaactgagctttctcctttccttgatgctgccgatcgcatgttagtgcta
ttagaccagctggctgaagatggtattactattcaccatctggatctggggggagggtta
ggcgtacgctatgacgatgaaacgccgcctgaacctatggagtacgcgactgcactgcta
gagaagttgaaagggcgtgaaaatctggaactgtgttttgaacctggtcgcgccattgca
gcgaatgctggcattatggtgacccaagtagaatatctgaaagatcaggacgaccatcat
tttgccattgtggatgctggaatgaatgacctgattcgtccatctctctatgaggcttgg
atgaagattattccggttattgaaaacggggccggacagcgtcaggtttatgatgtcgtg
ggtccagtttgtgagaccggtgatttcttgggtaaaaagcgtgagttgagtttaaatcag
ggagacttactggcggtacgcagcgcgggcgcttatggtttcagtatgagttcaaactac
aacacccgctgtcgtgcggctgaagttatggttgatggcgatcaagcataccttgtgcgc
gagcgcgaacgctttgaagatttatggcgcggtgagcatttggtgaaataa
DBGET
integrated database retrieval system