Pragia fontium: QQ39_17750
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Entry
QQ39_17750 CDS
T03952
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pfq
Pragia fontium
Pathway
pfq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QQ39_17750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfq03019
]
QQ39_17750
Enzymes [BR:
pfq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QQ39_17750
Messenger RNA biogenesis [BR:
pfq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QQ39_17750
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CCDC138_C
AAA_22
SwaI-like
Motif
Other DBs
NCBI-ProteinID:
AKJ43669
UniProt:
A0ABQ5LNT5
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All DBs
Position
4060464..4061747
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AA seq
427 aa
AA seq
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MSKTHLTEQKFADFALDPSVVKALENKGFHYCTPIQALALPHTVAGHDVAGQAQTGTGKT
LAFLASTFNYLLTHAPDSNRQVNQPRALIMAPTRELAVQIHNDAEALAHETGLKIGLAYG
GDGYDKQLKVLEAGVDILIGTTGRLIDYAKQNHIDLGAIQVVVLDEADRMFDLGFIKDIR
WIFRRMPATNQRLNMLFSATLSYRVRELAFEHMNNPQYVEVEPTQKTGHRIKEELFYPSN
EDKMRLLQTLIEEEWPDRCIIFANTKHTCEDIWGHLAADGHRVGLLTGDVAQKKRLHILD
DFTKGNLDILVATDVAARGLHIPEVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSITLA
CEQYALNLPAIEEYIEHSIPVSRYNSDALLTDFPAPKRLPRPRNAGGPRRSSGPRRNGPP
RNRKRPG
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttaactgaacagaagtttgccgacttcgcactagacccttcggta
gtaaaggcccttgaaaataaaggttttcattactgtacaccaattcaggcattggcgctt
cctcatacggttgcagggcatgatgttgcaggacaggcacaaacgggtaccggaaaaaca
ttggcttttctggcatcaacctttaattatttactaacacatgcacctgacagcaaccgc
caggtcaatcaaccacgcgccttaattatggccccaacccgcgaactggcggtacaaatt
cataatgacgctgaagcattagctcatgaaacaggtttaaagatcggtctggcttatggc
ggtgacggttacgataaacaactcaaagtattagaggctggcgttgatattctgatcggt
accaccggacgtcttatcgattatgccaaacaaaatcatatcgatctgggcgctatccaa
gtagtggtacttgatgaagccgatcgaatgttcgatcttgggtttattaaagacatccgt
tggatatttcgtcgcatgcctgcgactaaccaacgattgaatatgcttttttctgccacc
ctttcttatcgggtacgtgaattagcctttgagcatatgaataacccacaatatgttgaa
gttgagccaacccaaaaaactggccatcgaattaaagaagagcttttctatccgtctaat
gaagacaaaatgcgtttgttacaaacgttgattgaagaagaatggcccgatcgctgcatt
attttcgctaataccaaacatacctgtgaagatatctggggccacttggctgccgacggt
caccgggttggcttattaaccggtgatgttgcccagaaaaaacgcttacatatccttgat
gactttaccaaaggcaatctggatattttagtagcgaccgatgttgccgcccgcggttta
cacatccctgaagtgactcatgtatttaactacgatttacctgatgactgtgaagattac
gttcaccgcataggtcgtaccggacgtgctggagcgagtggtcattccattacattagcc
tgtgaacagtacgccttaaacttgccagcgattgaagagtatatcgaacattcaattccg
gtcagtcgttataattcagatgcgctgttaaccgattttcctgcaccaaaacgccttccg
cgtccacgtaatgcaggtggtccaagacgcagtagtggcccacgccgtaatggcccacca
cgtaacagaaaacgccctggataa
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