Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_01050
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Entry
PFREUD_01050 CDS
T01252
Symbol
mutM1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM)
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Pathway
pfr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFREUD_01050 (mutM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfr03400
]
PFREUD_01050 (mutM1)
Enzymes [BR:
pfr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PFREUD_01050 (mutM1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PFREUD_01050 (mutM1)
DNA repair and recombination proteins [BR:
pfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PFREUD_01050 (mutM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Zn_ribbon_TFIIB
Ribosomal_S13
Auto_anti-p27
DUF7577
Motif
Other DBs
NCBI-ProteinID:
CBL55617
UniProt:
D7GHP5
LinkDB
All DBs
Position
complement(131814..132677)
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AA seq
287 aa
AA seq
DB search
MPELPQVEALADFLRTDLVGSVIERLEVGAISALKTFDPPPDALVGRTVTAINRFGKHLD
VDAGGLHLVFHLARAGWLVWREKVPSTVIKPGKSRIALRVRLQGGAGFDLTEAGTQRKLA
VWIVRDPQQVPSIASLGPDPMAPGFTPAVFRQILAGAGRAQLKGILRDQHVIAGIGNAYS
DEILHDAKLSPFKPAANLTDDEVERLYAAIRDGLAAATERARGLAARDIKADKRAQLRIH
GHAGDPCPVCGTPIASVNFADSSLQYCPVCQTGGKKLADRRMSKLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgccccaggtggaggccctggccgatttcctgcgcaccgatctggtgggt
tcggtgatcgaacgcctcgaggtgggcgcgatcagcgcgctgaagacctttgacccgccg
cccgatgcgctggtgggccgcaccgtcaccgccatcaaccgcttcggcaagcacctcgac
gtggatgccgggggcctgcacctggtgttccacctggcgcgggccggctggctggtgtgg
cgcgagaaggtgccgtccaccgtgatcaagccgggcaagagccgcatcgcgctgcgggtg
cggctgcagggtggcgccggcttcgacctcaccgaggccggcacgcaacgcaagctggcc
gtgtggatcgtgcgcgacccccagcaggtgccgtcgatcgccagcctggggcccgatccg
atggcgcccgggttcacgccggcggtgttccggcagatcctggcaggggccgggcgcgcc
cagttgaagggcatcctgcgtgaccagcacgtgattgccggcatcggcaacgcctacagc
gacgagatcctgcacgacgcaaagctgagccccttcaagccggccgccaacctgaccgat
gacgaggtcgagcggctgtatgctgccatccgcgacggcctggccgccgctaccgagcgg
gcgcgcgggctggccgccagggacatcaaggccgacaagcgcgcccagctgcgcatccat
ggccacgccggcgatccctgccccgtgtgcggcacgccgatcgcgtcggtgaacttcgcc
gactcgtcgctgcagtattgcccggtgtgccagaccggcggcaagaagctggccgatcgt
cgcatgagcaagctgctcaaatag
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