Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_01710
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Entry
PFREUD_01710 CDS
T01252
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Pathway
pfr03030
DNA replication
pfr03430
Mismatch repair
pfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFREUD_01710
03430 Mismatch repair
PFREUD_01710
03440 Homologous recombination
PFREUD_01710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfr03032
]
PFREUD_01710
03400 DNA repair and recombination proteins [BR:
pfr03400
]
PFREUD_01710
Enzymes [BR:
pfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PFREUD_01710
DNA replication proteins [BR:
pfr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PFREUD_01710
DNA repair and recombination proteins [BR:
pfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PFREUD_01710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CBL55686
UniProt:
D7GHW4
LinkDB
All DBs
Position
208418..209029
Genome browser
AA seq
203 aa
AA seq
DB search
MAGYAVLDLETTGFSPARGDRIIEIGLVRLDPQGHVDDEWSTLVNPRRTVRATRVHHITS
ADVAAAPTMAELAPGLVDKLRDRVVVAHNSSFDVGFLTAELRTAGMTIPPEPIPSVCTMR
QSTRFLHARSRRLVDCCEAAGVSLRDAHSALGDARATAELFGHYLRAAGGELPWQDVVDR
ARRYPWPQALFVEPQTHLVQRPE
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggccggatacgcagtgctggacctcgagaccacaggcttctcgcccgcccggggcgat
cgcatcatcgagatcggcctggtgcgccttgacccgcagggccatgtggacgacgagtgg
tccacgctggtgaatccccggcgcacggtgcgcgccacgcgcgtgcaccacatcacctcg
gcggatgtcgcggcggcccccacaatggccgagctggcccccgggctcgtcgacaagctg
cgtgaccgggtggtggtggcgcacaattcgtcgttcgacgtgggcttcctcaccgccgag
ctgcgtaccgccggcatgacgattccgcccgagccgattccctcggtgtgcacgatgcgc
cagtccacccgcttcctgcatgcccgcagccgtcggctggtcgattgctgtgaggcggcg
ggcgtctcgttgcgcgatgcgcattcggcactgggcgatgcccgggccaccgccgagctg
ttcggccattacctgcgggcggccggtggcgagctgccctggcaggacgtggtcgatcgc
gcgcggcgctacccgtggccgcaggcgctgttcgtggagcctcagacgcacctggtgcag
cgtcctgagtga
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