Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_02090
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Entry
PFREUD_02090 CDS
T01252
Name
(GenBank) ABC transporter, transmembrane region
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Pathway
pfr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pfr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PFREUD_02090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfr02000
]
PFREUD_02090
Transporters [BR:
pfr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PFREUD_02090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
AAA_30
SMC_N
AAA_16
MeaB
DEAD
SRP54
AAA_23
RsgA_GTPase
AAA_28
AAA
AAA_29
TsaE
AAA_18
MMR_HSR1
AAA_24
EMC3_TMCO1
Zeta_toxin
DO-GTPase2
DUF87
NB-ARC
dNK
Rad17
Motif
Other DBs
NCBI-ProteinID:
CBL55724
UniProt:
D7GI02
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All DBs
Position
complement(246357..248420)
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AA seq
687 aa
AA seq
DB search
MSVTKDEDSTVSGKKNTNKPAANKRPDYAQSASQSRGPGPGGGRAAAVEKAVNFGPSLKR
LFGEMKPDRVLIVVVMVLGAIGVAANVYGPKLLGKAANAVFAGVIGKGLPAGVTKDQIVA
ALTQQGKTDQASMIAKLDVIPGQGIDFTHLGHILLLCLALYVTAAVLTFIQAFIVNRVVQ
RAVYRMRDQISAKIDRLPLAYFDGQPAGELLSRVTNDMDNVQQSLQQTMSQVINSLLTLI
GVIAMMLTVSWQLTLVTLCIVPLSLAVSIPIGKAAQKRFVGMWKSTGELNAKVEESYTGH
ALVKVFGRRREVEASFHDTNEEMYKASFGAQFISALIMPANFFIGNLNFVAIAVLGGLRV
ASGTMQLGDVTAFIQYSRMFTQPLTQITSMTNLLQSGVASAERVFEVLDAGEQTPDEHGS
LNLPVKGHVQFDHVDFSYSADQPLINNLSIEAKPGQQIAIVGPTGAGKTTLVNLLERFYD
VQGGKIAIDGVDIASVPRHQLRDQLGMVLQDTWLFGGTIHDNIAYGKIDATDDEVIQAAK
AAYVDRFVRTLPDGYETKIDEEGSNVSAGEKQLLTIARAFISDPSILILDEATSSVDTRT
EVLVQKAMNRLRSGRTSFVIAHRLSTIRDADLILVMEHGAIVEQGTHEGLIAAQGAYYRL
YESQFSAAEQPEELAGSATSGAKRASS
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcaccaaggacgaggactcgacagtgagtggcaagaagaacaccaacaagccg
gccgccaacaagaggcctgactatgcacagagcgcctcccagagccggggccccggcccc
ggcggtggacgcgctgccgccgtggagaaggcggtgaacttcggcccgtcgctgaagcgc
ctgttcggcgagatgaagcccgaccgggtgctcatcgtcgtggtgatggtgctcggcgcc
atcggcgtggccgccaacgtctatggccccaagttgctgggcaaggcggcgaatgccgtg
ttcgccggcgtgatcggcaagggcctgcccgccggggtgaccaaggaccagatcgtggcc
gcgctcacccagcagggtaagaccgaccaggcgtcgatgatcgccaagctcgacgtgatt
ccgggccagggcatcgacttcacccacctgggccacatcctgctgttgtgcctggcgctg
tatgtcaccgcggccgtgctcaccttcatccaggcgttcatcgtgaaccgcgtggtgcag
cgtgccgtgtaccgcatgcgcgaccagatcagcgccaagatcgaccggctgccgttggcc
tacttcgacggtcagcccgccggtgagctgctcagccgcgtgaccaatgacatggacaat
gtgcagcaatcgctgcagcagaccatgtcgcaggtgatcaactcgttgctgacgctgatc
ggcgtgatcgccatgatgctcaccgtcagctggcagttgacgctggtcaccttgtgcatc
gtgccgttgtcgttggccgtgtcgatcccgatcggcaaggcggcgcagaagcgcttcgtc
ggcatgtggaagtccaccggcgagctcaacgcgaaggtcgaggagtcctacaccggccat
gcgctggtgaaggtgttcgggcgtcgtcgcgaggtggaggcctcgttccacgacaccaac
gaggagatgtacaaggcgagcttcggggcacagttcatcagcgccctgatcatgccggcc
aacttcttcatcggaaacctgaacttcgtggcgatcgccgtgctcggcggcctgcgcgtt
gccagcggcaccatgcagctgggcgatgtgacggcgttcatccagtactcccggatgttc
acccagccgctcacccagatcacctcgatgaccaacctgctgcagtcgggtgtggccagc
gccgagcgcgtgttcgaggtgctggacgccggcgagcagacgcctgacgagcacggttcg
ctgaacctccccgtgaagggccatgtgcagttcgaccatgtggacttcagctactcggcc
gaccagccgctgatcaacaatctgtcgatcgaggccaagccgggtcagcagatcgccatc
gtcgggcccaccggcgccggcaagaccacgctggtgaacctgctcgagcgcttctacgac
gtgcagggcggcaagatcgcgatcgacggcgtggacatcgcctcggtgccccgtcaccag
ctgcgcgaccagctcggcatggtgttgcaggacacctggctgttcggcggcaccatccac
gacaacatcgcctacggcaagatcgacgccaccgacgatgaggtgatccaggctgcgaag
gccgcctatgtggatcgcttcgtgcgcaccctgcccgacggctatgagacgaagatcgac
gaggagggctcgaatgtgtcggccggtgagaagcagttgctcaccattgcccgggcattc
atctccgatccgtcgatcctgatcctcgatgaggccaccagctcggtggacacccgcacc
gaggtgctggtgcagaaggcgatgaaccgcctgcgcagtggtcgcacgagcttcgtgatc
gcccaccgcctgtcgacgatccgcgacgccgacctcatcctggtgatggagcacggcgcg
atcgtcgagcagggcacccacgagggcctcatcgcggcccagggcgcctactaccggctc
tacgagtcgcagttctctgcggccgagcagcccgaggagttggccggcagcgccacgtcg
ggcgccaagcgcgccagcagctga
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