Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_02170
Help
Entry
PFREUD_02170 CDS
T01252
Symbol
lysS
Name
(GenBank) Lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Pathway
pfr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pfr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PFREUD_02170 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pfr01007
]
PFREUD_02170 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfr03016
]
PFREUD_02170 (lysS)
Enzymes [BR:
pfr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PFREUD_02170 (lysS)
Amino acid related enzymes [BR:
pfr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PFREUD_02170 (lysS)
Transfer RNA biogenesis [BR:
pfr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PFREUD_02170 (lysS)
Prokaryotic type
Other AARSs
PFREUD_02170 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
CBL55732
UniProt:
D7GI10
LinkDB
All DBs
Position
257147..258754
Genome browser
AA seq
535 aa
AA seq
DB search
MSEQRPEKAPQSRGNQSAGKQSGGNQSRKNEPRKNGAADVEQDLPEQMRIRAEKRQRFLD
EGKQAYPVDLRRDHTLAEVRATWGHLAAGEETQDEVTIGGRVIFIRNSGKLCFATLQDGF
TPDQDAERLQIMLSKAEVGDESLAAWKADVDLGDFVWVRGRVIASKRGELSVMASEWKLA
SKALRPLPTLHNDLSEEARVRQRYNDLIVRPAARTMVRQRALITRKIRETLEEQGYLEVE
TPVLQSVHGGAAARPFTTHLNAFDIDMYLRIALELHLKRVMVGGADRVYEMGRVFRNEGV
DSSHSPEFTMLEAYQSWGDQFTIAETLKSIIMKVAEALDIFEIPTDQGVIDLKGEWIWLP
VYEGLSGEVGEEITTKTPVEHLRHIADAHKVDYDASWIDQKMVLHLFEELVEKGLTQPTF
VCDFPEIAQPLARRHRSKPGCIEAWDLIIGGMERGTGFSELIDPVIQREILTQQSLAAAA
GDPEAMQLDEDFLNALEQGCPPMGGLGLGVDRLVMLFTGAGIRETILFPLLRPLN
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgagcagcgtcccgaaaaggccccccagtcccgcggaaaccagtcagctggaaag
caatctggcggaaaccagtcccgcaagaacgagccccgcaagaacggggctgccgacgtc
gagcaggaccttcccgagcagatgcgcatccgcgccgagaagcgccagcgcttcctcgac
gagggcaagcaggcctacccggttgacctgcgtcgcgaccacacgctggccgaggtgcgc
gccacctggggccacctggccgccggcgaggagacccaggacgaggtgaccatcggcggg
cgggtgatcttcatccgcaattccggcaagctgtgcttcgccacgctccaggacggcttc
acccctgaccaggacgccgagcgcctgcagatcatgctgtcgaaggccgaggtgggcgac
gagtcgctggccgcctggaaggccgacgtcgacctgggcgatttcgtgtgggtgcgcgga
cgcgtcattgcgtccaagcgcggcgagctgtcggtgatggccagcgaatggaagctcgcc
agcaaggcgctgcgcccgctgcccaccctgcacaacgacctgtcggaggaggcgcgcgtc
cggcagcgctacaacgacctgatcgtgcgtccggcggcgcgcacgatggtgcgccagcgg
gcgttgatcacccgcaagatccgcgagacgctcgaggagcagggctacctcgaggtggag
acaccggtgctgcagtcggtgcacggcggcgcggcggcgcgtccgttcaccacgcacctg
aacgccttcgacatcgacatgtaccttcgcatcgccctggagctgcacctcaagcgcgtc
atggtgggtggggccgaccgcgtctatgagatgggtcgggtgttccgcaacgagggcgtc
gactcgtcgcacagccccgagttcacgatgctcgaggcctaccagagctggggcgaccag
ttcacgatcgccgagacgctcaagtcgatcatcatgaaggtggccgaggcgctcgacatc
ttcgagatccccaccgatcagggtgtcatcgacctgaagggcgaatggatctggctgccg
gtctatgaggggctgtcgggtgaggttggtgaggagatcaccaccaagaccccggtggag
cacctgcgccacatcgccgacgcccacaaggtggactacgacgcgtcgtggattgaccag
aagatggtgctgcacctgttcgaggagctggtggagaagggcctcacccagcccaccttc
gtgtgtgacttccccgagatcgcccagccgctggcgcgtcgccatcgctccaagccgggc
tgcatcgaggcctgggacctgatcatcggcggcatggaacgcggcaccggcttctcggag
ctgatcgatccggtgatccagcgcgagatcctcacccagcagtcgctggcggcggctgct
ggtgatcccgaggccatgcagctcgacgaggacttcctcaacgccctggagcagggctgc
ccgcccatgggtgggctcggactgggcgtcgaccggctggtgatgctgttcaccggcgcc
ggcatccgcgagaccatcctgttcccgttgctgcgcccgttgaactga
DBGET
integrated database retrieval system
