KEGG   Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_03710
Entry
PFREUD_03710      CDS       T01252                                 
Name
(GenBank) CRISPR-associated HD domain protein
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
pfr  Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Brite
KEGG Orthology (KO) [BR:pfr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pfr02048]
    PFREUD_03710
Enzymes [BR:pfr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PFREUD_03710
Prokaryotic defense system [BR:pfr02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    PFREUD_03710
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Cas3_HD AAA_30 Helicase_C
Other DBs
NCBI-ProteinID: CBL55905
UniProt: D7GII3
LinkDB
Position
complement(446756..449371)
AA seq 871 aa
MTITLDDFATFFRAVNAGHDPFPWQTALLTGIAGSARWPSAITAPTGSGKSAVVEVHVFL
NALYSAGSGPRVPRRLSTVVARRALVDSQADRAQRVADWLDEGDSPLAREMSALLQRLSA
ADDTPPLVIGHLRGGISLRSTWIDDPSACAVISATPDMWGSRLLLRGYGSSMAARPREGG
LLGLDNAVVIDEAHLSRQLVGTARWVSQHNADVAERLGVPGLQVVESSATTRSASPDGIG
IGPDDLADPTLRPRLTLPKPVTVVESAAWSGKKATDQYISTLVDQVQDMARTADDGTIGC
IVNRVDTALRVAERLGDDCPCWVGPTRPLDLAQLKRSYPALLGLDTAPRQAMPRFLVATQ
TVEVGVDLDLSGLVTELAPADSLTQRFGRVNRRGLRDSGPLTVVAPPQDKLAEQLPYSLD
DLADALQWLGGLPDTEGASPQAVADHPPKARTPERAIVKLPHVGDVMRWDATADLMWADE
DLELWVRDSLEPDDAQVGIVVRQPLPDEDAEVIPLLAATPVDQAEVFPAGIAVARAVVDR
ILEGRGDHARAFLSRADEITPLGADDASAIRPGDVVIVDAGHALTRHGVVVSDANRAESL
ETRWGTPDVAVIQKDSADSQWLSALADLTAEDAQTEYSDLGGEGLLTLGPPNALGELPWI
VVTSQKTAEEDEELRQEWSASDQPVLLTAHQSNVAGRARRLGERVALDPELTAALELAGA
HHDDGKADPRFQHLRLSNYSSLVLAKSEHRSSQAVVRRQFAGGELPRGWRHELRSVAVSW
AEVSLAPHGPLVARLIGTSHGRGRILPQPDAASLATPSDPAEVNERVAALFGSGEWPELM
AATSTTYGVWGCAYLEALLRAADCQVSKEGS
NT seq 2616 nt   +upstreamnt  +downstreamnt
atgaccatcacgcttgatgatttcgcaacgttcttccgtgccgtcaatgcgggccacgac
cccttcccgtggcagacggcgctgctgacgggtatcgctggatccgcgcggtggcccagc
gccatcacggcccccaccggaagtggcaagagcgcggtcgtggaagtgcatgtcttcctg
aacgccctgtacagcgccggctccgggccccgcgtgccccgccggttgtccaccgtggtc
gccaggcgcgcactggtcgactcacaggccgaccgcgcgcagcgggtcgccgactggctc
gacgagggcgactcccccctggctcgcgagatgagtgcgctcctccagcgcctcagcgcc
gccgatgacaccccgcccctggtgatcgggcacctgcgtggcggcatctcgctgcggtcc
acgtggatcgacgatccgtcggcctgcgcggtgatcagcgcaacgcccgacatgtgggga
agccgtctgctcctgcgggggtacggctcatccatggcggctcgtccccgggaaggtggc
ttgctgggcctcgacaatgcggtggtgatcgacgaggcccacctgagccgccagctggtg
ggaaccgcacgctgggtcagccagcacaacgccgatgtcgccgagcggctgggggtgccg
gggctgcaggtggtggaatcgtccgccaccacgcgttccgcatcgcctgatggcatcggt
atcgggccggacgacctcgccgatccgacccttcgtccgcgcctcaccctgcccaagccg
gtcaccgtcgtggaatcggcggcctggagtggcaagaaggccactgaccagtacatttca
accctggtcgaccaggtacaggacatggcacgaaccgccgacgatggcacgatcggatgc
atcgtcaaccgggtggatactgcgctgcgcgtggctgagcgccttggcgacgactgcccg
tgctgggtcggccccacgcgccccctggacctggcgcagctcaagcgcagttacccagcg
ctgttgggcctcgacaccgctcctcggcaggcaatgccgaggttcctggtggccacccag
accgtcgaggtgggggtcgacctagacctcagcggtctggtcaccgagctcgcgcccgcc
gacagcctcacccagcgcttcggacgtgtcaaccgccgcgggctccgggacagcggcccc
ctgacggtggtcgccccgccgcaggacaagctcgccgagcaattgccgtattcgctcgac
gaccttgccgatgctctgcagtggctcggcggcctgcctgacaccgagggcgcaagtccg
caggccgtggcagatcacccgccgaaggcgcgcaccccggaacgcgcgatcgtcaagctt
ccccatgtgggcgacgtgatgcgctgggacgccaccgccgacctcatgtgggccgatgag
gacctggagctgtgggtgcgcgattcgttggaacccgacgatgcgcaggtgggcatcgtc
gtgcgccagccgctccctgatgaggacgcggaggtcattcccctgctggcggccacccct
gtggaccaggcagaggtcttcccggcgggcatcgctgtcgcaagggcagtggtggaccgc
atcctcgagggccggggtgatcacgcacgcgccttcctgtcgcgtgccgacgagatcacg
ccgttgggtgccgacgatgcctcggccatccgtccgggcgacgtggtgatcgtggacgca
ggacatgccctgacgcgtcacggcgtggtggtcagcgatgcgaatcgggccgagagcctc
gagacgcggtggggaaccccggacgtggccgtcatccagaaggattcggccgattcgcag
tggctttcggcgcttgcggacctgaccgcggaggacgctcagaccgaatacagcgatctc
ggcggcgagggcctcctcaccctgggacccccgaacgcgctcggtgaactcccctggatc
gtcgtgacttcgcagaagaccgccgaggaggacgaggaacttcgccaggaatggtcggct
tccgatcagccggtgctcctcaccgctcaccagtccaatgtggccggacgggctcgccga
ttgggtgagcgcgtcgcgctcgatccggagttgacggcggcactcgagctggcgggcgcg
caccatgacgacggcaaggccgatccacgcttccaacacttacggctgagcaactattcg
tccctggtgctggccaagagcgagcatcgaagcagtcaagcggtcgtgcgccgccaattc
gcggggggggagctgccccggggttggcgccatgagctgaggtccgtggcggtctcgtgg
gcagaggtctcgctggcgccccatggccccttggtggcacggctgatcggcacgagccat
ggccggggaaggatcctgccgcaacccgatgcggcgagccttgccacccccagcgatccg
gccgaagtgaacgagcgcgtcgcggccctgttcgggtccggcgagtggccggagcttatg
gccgccacgagcactacctatggcgtgtggggttgcgcctatctggaggcgctcctgcgc
gccgccgactgccaggtctccaaggagggatcatga

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