Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_04370
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Entry
PFREUD_04370 CDS
T01252
Symbol
sbcD
Name
(GenBank) SbcD, DNA repair exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Brite
KEGG Orthology (KO) [BR:
pfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfr03400
]
PFREUD_04370 (sbcD)
DNA repair and recombination proteins [BR:
pfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PFREUD_04370 (sbcD)
Archaeal homologous recombinant proteins
PFREUD_04370 (sbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
CBL55971
UniProt:
D7GIP9
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All DBs
Position
complement(531811..533061)
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AA seq
416 aa
AA seq
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MSHPASDLVAMRILHTSDWHLGRTLRGVDLSDAHAAFLNQLVAVARSERADAVLVSGDVF
DRALPPLDAVNMLNDALARLTEVAPVVLIPGNHDSPQRLGLNAKLLRNQLHIRATLADIA
HPVVLPDSTGHDGLVVYAIPYLDPDMTRDRLGELAGVDGDGRIARSHEAVVGAALSMVHR
DLARRRSANGTRIPAAVMAHAFVTGAQPSDSERDLRIGGVDSVPAALFADVGADYVALGH
LHGAQAVAGSRDPASDHDEEAVMRYAGSPLAFSFSEQHQHKSTALVTFDEAGPVASVELI
PTPVPRRLSDVRGSLQQVLGEDFAAQRDDWTRVVVTGEDRPADLSRTVKKAFPHALEIRF
ESTLREREVRATVSAQADPLDVVGQFVADVSNRRPDAAELTVLRTALERATKQGER
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacccggcctctgacctcgtggccatgaggatcctgcacaccagcgactggcac
ctgggacgcacactgcgcggcgtcgacctcagcgatgcccatgcggccttcctgaaccag
ttggtcgccgtggcgcgcagcgaacgggccgacgcggtgttggtcagtggtgatgtcttt
gatcgggcgctgccgccgctcgatgcggtgaacatgctcaacgacgcgctggcccggctc
accgaggtggcgccggtggtgttgatcccgggcaaccatgactcaccacagcggttgggc
ctcaatgcgaagctgttgcgcaaccaattgcacatccgtgcgacgctcgccgacatcgcg
cacccggtggtgctgcccgacagcaccggccatgacgggctggtggtctacgcgatcccc
tacctcgatcccgacatgacccgtgaccgcctcggcgagctggcgggcgtcgacggggac
gggcggatcgcccgctcccatgaggccgtggtgggggccgcgctgtcgatggtgcaccgc
gacctggcacgtcgacgcagcgccaacggcacccgcataccggcagcggtgatggcgcat
gccttcgtcaccggggcccaacccagcgattccgaacgcgacctgcggatcggcggtgtc
gattcggtgccggctgcgctgttcgccgacgtcggcgccgactacgtggcgctgggccac
ctgcacggggcgcaggccgtcgcaggatcgcgggaccctgcttccgaccacgacgaggag
gccgtgatgcgctatgccgggtcgcccctggcgttctcgttctccgagcagcaccagcac
aagtccacggcgctggtgaccttcgacgaggcgggcccagtcgcctcggtggagctcatt
cccaccccggtgccgcgtcggctcagtgacgtgcgtggctccctgcagcaggtgctcggc
gaggacttcgccgcgcagcgcgatgactggacccgggtggtggtcaccggcgaggatcgc
cccgcggacctgtcgcgcaccgtcaagaaggcctttccccatgcgttggagatccggttc
gagtcaacgctgcgggagcgggaggtgcgcgcaacggtgagcgcgcaggccgacccgctc
gatgtggtgggccagttcgtcgccgatgtgagcaatcgtcgccccgatgccgccgagctc
acggtgttgcgcaccgcgttggaacgcgcgacgaagcagggggaacgctga
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