Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_07630
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Entry
PFREUD_07630 CDS
T01252
Symbol
dinB
Name
(GenBank) Nucleotidyltransferase/DNA polymerase involved in DNA repair (DNA polymerase IV)
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Brite
KEGG Orthology (KO) [BR:
pfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfr03400
]
PFREUD_07630 (dinB)
Enzymes [BR:
pfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PFREUD_07630 (dinB)
DNA repair and recombination proteins [BR:
pfr03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
PFREUD_07630 (dinB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
HHH_5
Cdd1
IMS_HHH
DNA_pol_lambd_f
POLH-Rev1_HhH
DUF4332
Motif
Other DBs
NCBI-ProteinID:
CBL56294
UniProt:
D7GCN3
LinkDB
All DBs
Position
869710..871161
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AA seq
483 aa
AA seq
DB search
MRATASILHLDLDAFFASVEQRDKPSLRGKPVAVGGVGDRGVVATASYEARKLGLHSAMS
TSQARHLAPHAAYLSPRGDAYRQSSRIVMALLGELSPLVEPLSIDEAFVDLEAGGQDTSP
EAIAGLVRELRAEIVHRTEGLHASVGVGTSKLMAKLGSERAKPNGQLIVPPGSERDVLSP
LPANAIPGVGPATMDRLSRLGIRTVGDLREASVAELVRELGQAVGESLHVLASGRDDRAV
SPRGEAKSISVEDTFDSDLTDPAVIASVIERDARAVAGRLTRAGLFARTVTVKVRLADFT
TLSRSRTLSGATDNPERIAATAQALITGVRIGQGFRLIGVGVGGFAQAAQEELFVLDDQQ
ASVAPVMEERQVASALRRGSQSWSPGAEVEHDEHGRGWVWGSGLGVVTVRFETRRTGIGP
VRSLRADDPALHRAGLLPMEFDHPDEEAEPEHGPGWARLRPTSPTPDTGADRGTSTPGTS
DPG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcgggccacggccagcatcctgcacctcgacctcgacgccttcttcgcctcggttgag
caacgcgacaagccgtccctgcgcggcaagccggttgccgtcgggggcgtcggggaccgc
ggagtggtggccaccgccagctatgaggcccgcaagctcggcctgcattcggcgatgagc
acctcccaggcccgtcacctggcgccgcacgccgcctatctcagcccgcggggcgacgcc
taccggcagtcgagccgcatcgtgatggccctgttgggcgagctcagcccgctcgtggag
cccctgagcatcgacgaggccttcgttgacctggaggccggcggccaggacaccagcccc
gaggcgatcgccggcctggtgcgtgagctgcgcgccgagatcgtccatcgcaccgagggc
ctgcacgcatcggtcggtgtcggcaccagcaagttgatggccaagctcggcagcgagcgg
gccaagccgaatgggcagttgatcgtgccaccgggtagcgaacgcgatgtgctgtcgccg
ctaccggccaacgccatccccggggtcgggccggccaccatggaccggctgtcacggttg
gggatccgcaccgtgggtgacctgcgggaggccagcgtcgcggagctggtgcgcgagctg
gggcaggccgtgggggagtcattgcacgtgcttgcctcgggacgcgacgaccgggcggtg
agcccacgcggcgaggcgaagtcgatctcggtggaggacaccttcgactccgacctcacc
gatccggcagtcatcgcctcggtgatcgagcgcgatgcgcgcgcggtggccggcaggctc
acccgggcgggcctgttcgcccgcaccgtcaccgtgaaggtccgactggccgacttcacg
acgctgtcccgctcacgcacgctgtcaggcgccacggacaacccggagcggatcgcggcg
acggcccaggcgctgatcaccggcgtgcgcatcgggcagggattccgcctgatcggcgtc
ggcgtgggcggcttcgcgcaggccgcccaggaagagctgttcgtgctcgacgaccagcag
gcatccgtggccccggtcatggaggaacgccaggtggcctccgcgctgcggcggggctcc
cagagctggtcacccggggccgaggtggagcatgacgagcacggccgcggctgggtgtgg
ggatcgggcctgggagtggtgacggtgcgcttcgagacgcgtcgcaccgggatcggaccc
gtgcgctccctgcgtgccgacgaccccgccctgcatcgcgccggcctgctgccgatggaa
ttcgaccacccggacgaggaggccgagcccgaacacggacccggctgggcccgcctgcgt
ccgacgtcgccgaccccggatacaggggcagacagggggacgagcacccccggtacctcc
gaccccggctga
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