Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_08060
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Entry
PFREUD_08060 CDS
T01252
Name
(GenBank) long-chain fatty-acid CoA ligase (AMP-binding enzyme) (long-chain-fatty-acid---CoA ligase)
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Pathway
pfr00061
Fatty acid biosynthesis
pfr00071
Fatty acid degradation
pfr01100
Metabolic pathways
pfr01212
Fatty acid metabolism
pfr02024
Quorum sensing
pfr04146
Peroxisome
Module
pfr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pfr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PFREUD_08060
00071 Fatty acid degradation
PFREUD_08060
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PFREUD_08060
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFREUD_08060
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pfr01004
]
PFREUD_08060
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfr04147
]
PFREUD_08060
Enzymes [BR:
pfr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PFREUD_08060
Lipid biosynthesis proteins [BR:
pfr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PFREUD_08060
Exosome [BR:
pfr04147
]
Exosomal proteins
Exosomal proteins of breast milk
PFREUD_08060
Exosomal proteins of breast cancer cells
PFREUD_08060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
CBL56333
UniProt:
D7GCS2
LinkDB
All DBs
Position
916781..918670
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AA seq
629 aa
AA seq
DB search
MNSVREEILSACPPSYPASFRARVARAPHAVAYRVPQHQEPEVWKDLTWSQVADEVDQIA
AGFIALGVQPEQRVAIAAMTRIEWVLADLGIACAAAATTTVYPNSQPDDELFILQDSESV
IVVAENWKQLQKVVDQSELNAQVHHIVLFDDDRPIDRADAGGDRVVTWDALHALGRDYLA
AHPTALDERLDLMEPDTLATLVYTSGTTGRPKGVRIPHRAWTYQGEAMHHMWRGIIDDRD
VVYLWLPLSHVYGRDLLAAQMAIGFIMPVDGRIDRIVEGMGETHPTIMVGVPRIYEKIRS
AVITQSPANGIQGRIARWAFAVGRESRPYRLAGKHAPWPARLRYAVADRLVFSKLRDTLG
GSIRFMISGSAKLSTQVQTWFYSAGLLVLEGYGLTETAAIAAVNLPDKPKFGTVGPVTPG
IDARIAADGELLLSGPIVADGYYHLPEETAEAFEDSWFHTGDIGHFDEDGYLTITDRKKD
LMKTSNGKYVAPQKVEAALLANVPYISQAVAVADGHPYVIALVTMDHDQLMRWGKNHGHP
NDDYATLSQLPEIRESIDKFVRKANERLDRWETVKRYAILDHEFAQDTGELTPSMKVKRP
VVLARYEKTIDDRYEQTTVSDLTPFTGGK
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcgttcgcgaggagatcctcagcgcctgcccacccagctatccggcttccttc
cgtgcacgggtggcccgggccccccatgcggtggcctatcgggtgccgcagcaccaggag
ccggaggtctggaaggacctcacctggtcgcaggttgccgacgaggtcgaccagatcgcc
gcaggcttcattgcgctgggcgtacagcccgagcagcgggtggcgatcgccgcgatgacc
aggatcgaatgggtgctggccgacctgggcatcgcctgcgccgccgcggccacgacgacc
gtctacccgaacagccagcccgatgacgagctgttcatcctgcaggactccgaatcggtc
atcgtggtggccgagaactggaagcaactccagaaggtggttgaccagtcagagctcaat
gcgcaggtgcaccacatcgtactgttcgacgatgatcgccccatcgaccgggccgacgcc
ggcggcgatcgggtggtcacctgggatgcgctccacgcgctcgggcgtgactacctggcg
gcccatcccacggcgctcgacgagcggctcgacctgatggaacccgacaccctggcaacc
ctggtgtacacctcgggcacgaccggacggcccaagggcgtccgcatcccgcaccgggcg
tggacctatcagggcgaggccatgcatcacatgtggcgcggcatcatcgacgaccgcgac
gtggtctacctgtggctgcccctgtcgcatgtctacggacgcgacctgctggccgcccag
atggccatcggcttcatcatgccggtggacgggcgcatcgaccgcatcgtggaggggatg
ggggagacccatcccacgatcatggtcggagtgccgcgcatctacgagaagatccggtcg
gcggtgatcacccagagcccggcgaacggcatccagggccgcattgcgcgctgggccttc
gcggtgggccgcgaatcgcgtccctaccggttggccggcaagcacgcaccctggccggca
cgcctgcgctatgcggtggccgacaggctggtgttcagcaagctgcgcgacaccctgggc
ggatcgatccgcttcatgatctcggggtccgccaagttgtccacccaggtgcagacttgg
ttctactcggccggcctgctggtgctcgagggctatgggctcaccgagaccgccgccatc
gcggcggtgaacctgcccgacaagccgaagttcggcacggtgggcccggtcacgcccggc
atcgacgccaggatcgccgccgacggcgagttgctgctcagcggccccatcgtggcggat
ggctactaccacctgcccgaggagaccgccgaggccttcgaggacagctggttccacacc
ggcgatatcggccacttcgatgaggacggctatctgacgatcaccgatcgcaagaaggac
ctcatgaagacctccaacggcaagtacgtggcgccgcagaaggtcgaggcggccctgctg
gccaatgtgccctacatctcgcaggccgtcgcagtggccgacgggcatccctatgtgatc
gccctggtgacgatggatcacgaccagttgatgcgctggggcaagaaccatggccatccc
aatgatgactatgcgacgctgagccagcttcccgagatccgcgagtcgatcgacaagttc
gtgcgcaaggcgaatgagcggctcgaccgttgggagaccgtgaagcgctatgcgatcctc
gaccacgagttcgcccaggacaccggcgagctgacgccgagcatgaaggtgaagcgtccg
gtggtgctggcgcgctacgagaagacgatcgacgaccggtacgaacagaccacggtgtcc
gacctgacgcccttcaccggcggcaagtag
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