Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_10300
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Entry
PFREUD_10300 CDS
T01252
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase (DAP decarboxylase)
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Pathway
pfr00300
Lysine biosynthesis
pfr00470
D-Amino acid metabolism
pfr01100
Metabolic pathways
pfr01110
Biosynthesis of secondary metabolites
pfr01120
Microbial metabolism in diverse environments
pfr01230
Biosynthesis of amino acids
Module
pfr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PFREUD_10300 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PFREUD_10300 (lysA)
Enzymes [BR:
pfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PFREUD_10300 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
CBL56554
UniProt:
D7GDE3
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Position
1163371..1165002
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AA seq
543 aa
AA seq
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MLHVPGPARRSRRDSNPRTRLRRAVLYPLSYGSMAALGWPSDSLAPRVALRPARHTVVRG
RTPALRRGGFLEEWWTVTHMHVAGAIHADVSTPGPQWLTKPADLNELDPALWSRNVSRDE
HGRVGVAGIDVVDAIEREGSPLYLFDEDDFRHRARDFKSAFDGWNVYYAGKAMLTRTIAR
LVMEEGLGMDVCSGGELQVALAGGMDPARIGMHGNNKTSDELALALSNGVGHIVVDSLDE
IGRIEQLCRDNDWHARVMVRVTPGVEAHTHEYIATAHEDQKFGFSIANGQAMVAMVRCHY
SPYMDLLGIHSHIGSQIFDTGGFEVAALRTMKLSSQFTDATGVHLPELNLGGGFGIAYTS
ADSPSTPDALATGLREIVEHEARAHSMAVPKMSIEPGRAIVGPTTMAIYTVGTVKVVDLD
GGGQRVYVSVDGGMSDNIRPALYGAEYSAVLANRTSSEPGVLSRVVGKHCEGGDILVRDV
FLPSDIEPGDLIAVPDMGAYSREMASNYNHALRPPVVRVHNGELSAMIRRETMDDLLSLD
VGR
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
ttgctgcacgtcccgggtccggcacggcgctcccggagggattcgaaccctcgcacccgc
ctccggagggcggtgctctatcccctgagctacgggagcatggccgccttggggtggccg
tccgacagcttagcgccccgggttgcactacggccagcgcgtcacacggtcgtccgcggg
cgaacgcctgcactccggcgtggcggctttctggaagaatggtggaccgtgacccatatg
catgttgcgggcgcgattcacgccgacgtctcaaccccggggccccagtggctcacgaag
ccggccgacctcaacgaactcgaccctgccctgtggagccgcaatgtctcccgggacgag
cacgggcgtgtcggtgtggccggaatcgacgtggttgatgcgatcgagcgtgagggctcc
ccgctgtacttgttcgacgaggacgacttccgccaccgggcccgtgacttcaagagcgcc
ttcgacggatggaatgtctattacgcgggcaaggcgatgctcacccggacgattgcccgt
ctcgtgatggaggagggcctgggcatggacgtgtgctcaggtggggaactccaggtcgcc
ctcgccggcggcatggacccggcacggatcgggatgcacggcaacaacaagaccagtgac
gagctggcgctggccctgagcaacggcgtgggccacatcgtggttgattccctggacgag
atcggacgcatcgaacagctgtgccgcgacaatgactggcatgcgcgtgtgatggtgcgg
gtgacccccggggttgaggcgcacacccatgagtacatcgccaccgcccacgaggaccag
aagttcggcttctcgattgcgaacgggcaggccatggtcgccatggtgcgctgccactac
agcccctatatggacctgttggggatccacagccacatcgggtcgcagatcttcgacacc
gggggcttcgaggtggccgccctgcgcaccatgaagctgtcgagccagttcaccgacgcg
accggcgtgcacctgcccgagctgaacctggggggcggtttcggcattgcctacaccagc
gccgattcgccctccacccccgatgcgctggccaccgggctgcgcgagatcgtggagcac
gaggcgcgggcacattcgatggccgtgccgaagatgtccattgagccgggcagggccatc
gtgggacccaccaccatggccatttacacggtcggcaccgtcaaggtcgtcgacctggac
ggcggtggccagcgcgtgtacgtgagtgtcgacggcggcatgagcgacaacatccgcccg
gccctgtacggcgccgaatactctgcggtcctggcaaatcgcacgtcctccgaacccggc
gtgctgagccgggtggtcggcaagcactgtgagggcggcgacattctggtgcgcgatgtc
ttcctgccgtccgacattgagcccggcgacctcattgccgtgcccgatatgggggcctac
agccgcgaaatggccagtaactacaatcatgcgcttcgccctccggtggtgcgcgtgcac
aacggagagctctcggcgatgattcgccgtgagaccatggacgacctcctcagtctcgac
gtgggacgctga
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