Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_12800
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Entry
PFREUD_12800 CDS
T01252
Symbol
gyrA2
Name
(GenBank) DNA gyrase subunit A (DNA topoisomerase (ATP-hydrolysing))
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Brite
KEGG Orthology (KO) [BR:
pfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfr03032
]
PFREUD_12800 (gyrA2)
03400 DNA repair and recombination proteins [BR:
pfr03400
]
PFREUD_12800 (gyrA2)
Enzymes [BR:
pfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PFREUD_12800 (gyrA2)
DNA replication proteins [BR:
pfr03032
]
Prokaryotic type
DNA Topoisomerases
PFREUD_12800 (gyrA2)
DNA repair and recombination proteins [BR:
pfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PFREUD_12800 (gyrA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF7342
Motif
Other DBs
NCBI-ProteinID:
CBL56796
UniProt:
D7GE35
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All DBs
Position
1425771..1428233
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AA seq
820 aa
AA seq
DB search
MARTKTPPADDFEERIVDVDVSSEMQTSYLEYAYSVIYARALPDARDGLKPVQRRILYGM
SEQRLTPDHPFVKCARVVGDVMGKLHPHGDSAIYDALVRMGQDWSMRLKLVDGHGNFGSL
DAGPAAMRYTECRLAPAAMPMLDGLHEDTVDFRPNYDGKQLEPAVLPAAFPNLLVNGATG
IAVGMATNIPSHNLGEVVAALKYLLKNPGAEVDELMRYVPGPDLPTGGKIVGLDGIRAAY
ATGRGIFRTRATARIEQVSPRRRGIVITELPFAVGPEKIIDQIKVLVRSKKITGISDVKD
LTDLTYGLRLVIEVKNGINPEALLAQLYKHTKLEDSFGINAVALVDGQPRTMTLKEMLQV
YLDHRLEVILRRAKFQLGKAQDRLHLVEGLLLAMIDIDDVIAIIRSSDDVPEARQRLMET
FELDEIQANYILDMQLRRLTKLSRIELETERDELRRRITELTELIDDPDLQRDTVASQLS
EMAATYGSPRRTVLLEGSGAAAALPAQPLEIPDDPCWVMMSSTGLMARMTRPADGDDPGH
LPTSGPRGRHDVVVAAIAVTAHAQFGVLTSHGRLVKAEAIDLPEVVGTANAPSLRGGSRV
EDLLVLTDAERAVGLTTLAEDSAGLALGTRRGVVKRVNPEVLSKDEWDVIRLEDNDEVVG
GVELTDPSDELVFVTSDAQLLHFAADLVRPQGRSGGGVAGVRLTGGSSVVWFGVSPATDA
VVVTLSGTSSMLPGAQTGSVKVTPFEDYPPKGRATGGVRCHRFLKGEDGLLLAWVGPQPV
IAAGADGSPVDLPPATGKRDGSGTPATWPITAVSSRTMPH
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcacaaagacgccgcccgccgacgacttcgaggagcgcatcgttgacgtcgac
gtctcgtcggagatgcagacgtcgtatctcgagtacgcctattcggtgatctatgcccgg
gcactacccgatgcgcgcgacggcctcaagccggtgcagcgccgcatcctctacggcatg
agcgagcagcgcctgacccccgaccatccgttcgtcaagtgcgcacgcgtcgtgggcgat
gtgatgggaaagctgcacccccacggcgattcggcgatctatgacgccctggtgcgcatg
ggccaggactggtcgatgcggctgaagctggtcgatgggcacggcaacttcggatccctc
gatgccggccccgcggccatgcgctacaccgaatgccggttggcccccgcggccatgccg
atgctcgatggcctgcacgaggacaccgttgacttccgccccaactatgacggcaagcaa
ctcgagcccgcggtgctgccggcggccttcccgaacctcttggtcaacggcgccaccggc
atcgccgtcggcatggccaccaatattccctcgcacaacctgggcgaggtcgtggcggca
ttgaagtacctgctcaagaacccgggcgccgaggtcgatgagttgatgcgctatgtgccg
gggccagacctgccgaccggtggaaagatcgtcgggctggacggcatccgcgccgcctat
gcgaccgggcgcggtatcttccgcacccgcgcgacggcccggatcgaacaggtgagcccc
cgacgtcggggcatcgtgatcaccgagctgcccttcgcggtgggccccgagaagatcatc
gaccagatcaaggtgctggtgcgttcgaagaagatcaccggcatctccgacgtcaaggac
ctcacggacctcacctatggcctccgcctggtgatcgaggtgaagaacggcatcaatccc
gaggccctgcttgcccagctgtacaagcacaccaagctcgaggactccttcggtatcaat
gcggtggccctggtggatggccagccgcgcacgatgacgctcaaggaaatgctgcaggtc
tacctggaccaccgcctggaggtgatcctgaggcgcgccaagttccagctcggcaaggcc
caggaccgcctgcacctggtcgagggcctcctgctggccatgatcgacattgacgacgtg
atcgcgatcatccggtcatccgacgatgtccccgaggcccgccagcgcctcatggagacc
tttgagctggacgagatccaggctaactacatccttgacatgcagctgcgacgcctgacc
aagctgtcgcgcatcgagctcgagaccgaacgcgacgagctgcgccggcgcatcaccgag
ctcaccgagctgatcgacgatcccgacctgcagcgtgacaccgtcgcctcccagctcagt
gagatggccgccacctacggcagcccacgacgcaccgtgctgctcgaggggtcaggggcc
gcggcggccctgcctgcccagcccctggagatccccgacgacccctgttgggtgatgatg
agctccaccggattgatggcccgcatgacgcgccccgcggacggggacgatcccgggcac
ctgcccacaagcggtccccggggccgccatgatgtggtcgttgcggcaattgccgtgacc
gcacacgcccagttcggtgtgctcacctcccacggacggctggtgaaggccgaggcaatc
gacctaccggaggtcgtgggcaccgcgaacgcaccgagcctgcgaggtgggtcacgcgtc
gaggacctgctggtgctcaccgacgcggagcgggccgtggggctgaccaccctggccgag
gattccgcgggcctggccctgggcacgcgtcgcggggtcgtcaagcgggtcaaccccgag
gtcctcagcaaggacgaatgggatgtcatccgccttgaggacaacgacgaggtcgtgggt
ggcgtcgaattgactgacccgtccgatgagctcgtcttcgtcaccagtgatgcccagctg
ctgcacttcgccgcagacctggtgcgtccccagggccgcagcggcgggggcgtggccggc
gtgcgcctgaccgggggttcctccgtggtgtggttcggcgtgagccccgccaccgatgcc
gtggtggtgaccctgtcggggacgtcgagcatgctgcccggagcccagaccggaagcgtc
aaggtgacgccgttcgaggactacccacccaagggccgggccaccggcggggtgcgctgc
caccgcttcctgaagggcgaggacgggctcctgttggcctgggtcggaccacagccggtg
atcgccgccggtgcggacggttcgccggtggacctcccgcccgcgaccggcaagcgtgat
ggttccggaaccccggcgacctggccgatcaccgcggtgagctcccgcaccatgccgcac
tga
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