Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_13070
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Entry
PFREUD_13070 CDS
T01252
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Pathway
pfr00300
Lysine biosynthesis
pfr00470
D-Amino acid metabolism
pfr01100
Metabolic pathways
pfr01110
Biosynthesis of secondary metabolites
pfr01120
Microbial metabolism in diverse environments
pfr01230
Biosynthesis of amino acids
Module
pfr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PFREUD_13070 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PFREUD_13070 (dapF)
Enzymes [BR:
pfr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PFREUD_13070 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
CBL56825
UniProt:
D7GE64
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All DBs
Position
complement(1464906..1465739)
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AA seq
277 aa
AA seq
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MRNWEFAKGHGTMNDFVLLKDRTNSTELSPQDVRYLCDRRAGIGGDGVIRAVWAKYMPSW
TGDPNMWFMDYRNSDGSVAEMCGNGLRVFGHFLLDENLADGPDIQVATRAGQRDVAEMND
ELFRAGIGHVQVASQPTHVSLDGVEYEATTVDVGNPHAVVFLPADVDLESLDLSHPPRFD
TRVYPAGTNIEFVRVHSDRSLSMRVFERGSGETMSCGTGVVATAAAQGARLGEQGRFGVD
VPGGHLEVELDDSMAHLTGPAVIVAHGSVVLPDEAAR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaggaactgggagttcgccaagggccacggcaccatgaatgacttcgtgctgctcaag
gatcggaccaacagcaccgagttgagcccccaggacgttcgctatctgtgtgaccggcgc
gccgggatcggcggcgacggggtgatcagggccgtgtgggccaagtacatgcccagctgg
accggcgatcccaacatgtggttcatggactatcgcaactccgacggctcggtcgccgag
atgtgcggcaacggattgcgggtgttcggccacttcctgcttgatgagaacctcgccgac
ggacccgacatccaggttgccaccagggcggggcagcgcgatgtggcagagatgaacgac
gagctcttccgggccggcatcggtcacgtgcaggttgcctcgcagcccacgcatgtgtcc
ctggatggcgtggaatacgaggccaccaccgtggatgtcggcaatccgcacgccgtggtc
ttcctccccgccgacgtcgacctggaatccctggacctcagtcacccaccgcgcttcgac
acccgtgtctacccggccggtacgaacatcgaattcgtgagggtgcactccgaccgctcc
ctgtcgatgcgcgtcttcgagcgtggctcgggggagacgatgtcgtgtggcaccggggtc
gtggcaacggccgctgctcagggtgcccggctgggtgagcagggacgtttcggggtggac
gtgcccggtggtcacctcgaggtggagctcgacgactcgatggcccacctcaccggcccg
gcggtcatcgtcgcgcacggctcagtggtgctgcccgatgaggcggcacgctga
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