Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_13630
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Entry
PFREUD_13630 CDS
T01252
Symbol
xerD
Name
(GenBank) Site-specific recombinase
KO
K04763
integrase/recombinase XerD
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Brite
KEGG Orthology (KO) [BR:
pfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pfr03036
]
PFREUD_13630 (xerD)
Chromosome and associated proteins [BR:
pfr03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
PFREUD_13630 (xerD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
MDMPI_N
Motif
Other DBs
NCBI-ProteinID:
CBL56880
UniProt:
D7GEB9
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All DBs
Position
complement(1523311..1524306)
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AA seq
331 aa
AA seq
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MADGAARPPSHGNKPVSGPTAGRLGNWLEDYLDHLGVERGLSPNTVAAYRRDLTRYLRHL
SSRGIDDPSRITTADVTSFEEELSRGDASHKALAPSSVGRAVVAVRMFHGFAAREGLVDH
NVAAALHPPRAGKRLPKALGVDEVARLIDSIERQTPIGLRDAALFEVLYGTGARISEALS
LDVDDLTRVLADPDGPLRVVGKGNKERVVPLGSYARSAVQAWLVRGRPALAERAREFTPA
LFLNTRGARLSRQSAWEALRTRARQAGITADIGPHSLRHSFATHLLDGGADIRVVQELLG
HASVSTTQIYTEVTAQQLREVYSSSFPRAHD
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
ttggctgacggtgcggcccgtccgccatcgcatggcaacaagccagtttccgggccgact
gccggtcgactcggaaactggcttgaggactatctggaccacttgggagtcgagcgcggg
ctgtcacccaacacggtggctgcctatcgtcgcgacctgacccggtatctgcgccacctc
agctcccgcgggatcgacgatccttcccggatcacgaccgctgatgtgaccagcttcgag
gaggagctgtcccgcggggacgcgtcacacaaggccctggcgcccagcagcgtgggtcga
gccgtggtggcagtgcgaatgttccacggctttgccgcgcgcgagggcctggttgaccac
aatgtcgcggccgcactgcatccgccacgagccggcaagcgcctgcccaaagccctgggc
gtcgacgaggtcgcccggctcatcgactccatcgagcggcagactccgatcggcctgcgc
gatgccgccctgttcgaggtgctctacggcacgggcgcccgcatcagcgaggccctgagc
ctggacgtcgatgacctcacccgggtgctggcagaccccgatggccccctccgggtggtc
ggcaaggggaacaaggaacgcgtcgtgccgctgggcagctacgcgcgcagcgcagtgcag
gcctggctggtgcggggtcgacccgccctggccgaacgtgccagggaattcaccccggca
ctgttcctcaacacccgcggtgcccgactctcccgccagagcgcgtgggaggccctgcga
acgcgggcacgtcaggccgggatcaccgctgatatcggcccgcacagccttcgccactcc
ttcgccacgcacctgctggacgggggtgcagacatccgcgtcgtgcaggaactgctcggc
cacgcgtcggtctcgacgacgcagatctacaccgaagtgaccgcccagcagctgcgcgag
gtctattccagttcctttcccagggcccatgactga
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