Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_14570
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Entry
PFREUD_14570 CDS
T01252
Symbol
pnpA
Name
(GenBank) Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) (Guanosine pentaphosphate synthetase)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Pathway
pfr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PFREUD_14570 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfr03019
]
PFREUD_14570 (pnpA)
03016 Transfer RNA biogenesis [BR:
pfr03016
]
PFREUD_14570 (pnpA)
Enzymes [BR:
pfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PFREUD_14570 (pnpA)
Messenger RNA biogenesis [BR:
pfr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PFREUD_14570 (pnpA)
Transfer RNA biogenesis [BR:
pfr03016
]
Prokaryotic type
tRNA degradation factors
PFREUD_14570 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
KH_KhpA-B
S1_RRP5
KH_2
Motif
Other DBs
NCBI-ProteinID:
CBL56956
UniProt:
D7GEJ5
LinkDB
All DBs
Position
complement(1600401..1602611)
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AA seq
736 aa
AA seq
DB search
MEGPDIKFSEAIIDNGKFGKHIMRFETGLLAQQADGAAAVYLDGDSMLLSTTTAQKKPRE
AIDFFPLTVDVEEKMYAVGRIPGSFFRREGRPSENAILTCRLIDRPLRPAFKKGLRNEVQ
VVVTVLALNPQVEYDMVAMNAASMSTQISGLPFSGPIGAVRISLIGDQWVCLPTVDQEKD
ATFSMVVAGRVLPDGDIAIMMVEAGGTEATWELVKGGRTAPTEEVVAAGLDAAKPFIKVL
CDAQAELAAQVNKETYDFPVFKEYEDDVWDRVKELGYDKLDKIEQVAAKLDRQEAESDLK
HEIVGQMVGEEDFEGREGEIAGAFKALEKKIVRDRVLSKGVRIDGRGPKDIRALSSEVGV
VPRVHGSGLFQRGETQVLGITTLNMLDMEQKLDTLSSVHTKRYMHQYEMPPYSTGETGRV
GSPKRREVGHGALASRAIVPVLPTREEFPYAIRQVSEAIGSNGSTSMGSVCASTLSLLNA
GVPLKAPVAGIAMGLMSETDESGKTSYLALTDILGAEDALGDMDFKVAGTSEFVTALQLD
TKLNGIPADVLAAALLQARDARHAILDVIHDAIDSPDEMSPYAPRIITVHIPTDKIGEVI
GPKGKVINQIQDDTGANISIEEDGTIYVGADNGDAAEAARTMINAIANPTMPERGERYLG
TVVKLTSFGAFISLLPGKDGLLHISKLRALNDGKRVENVEDVLSVGQKLQVEISDIDDRG
KLSLVPVLDEDDSDDE
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
gtggagggacctgacatcaagttttccgaggccattatcgataatggcaagttcgggaag
cacatcatgcgtttcgaaaccggtctgctggcccagcaggccgacggcgctgctgccgtc
taccttgacggcgacagcatgctgctgtccaccacgacggcacagaagaagccgcgcgaa
gcgatcgacttcttccccctgaccgtcgacgtcgaagagaagatgtatgccgtgggtcgt
atccccggctccttcttccgtcgcgagggtcgcccctcggagaacgcgatcctcacctgt
cgcctgattgaccgtccgctgcgtcccgccttcaagaagggcctgcgcaacgaggtccag
gtggtcgtgaccgtcctggcgctcaacccgcaggtcgagtacgacatggtggccatgaac
gccgcctcgatgtccacccagatctcgggcctgccgttcagcgggccgatcggtgccgtg
cgcatcagcctcatcggtgaccagtgggtgtgcctgcctaccgtcgaccaggagaaggac
gcaaccttctcgatggtcgttgccggccgtgtactgcccgacggtgacatcgccatcatg
atggtcgaggccggcggcaccgaagccacctgggagctcgtcaagggcggacgcaccgca
cccaccgaagaggtcgtggccgccggactggatgccgcaaagcccttcatcaaggtgctg
tgcgacgcccaggccgagctcgccgcccaggtgaacaaggagacctacgacttccccgtg
ttcaaggaatacgaggacgacgtgtgggatcgcgtcaaggaactcggctacgacaagctc
gacaagatcgagcaggttgccgccaagctggatcgtcaggaggccgagagcgacctcaag
cacgagatcgtcggccagatggtgggcgaggaggacttcgagggccgcgagggcgagatc
gccggtgccttcaaggcccttgagaagaagatcgtgcgtgaccgtgtgctcagcaagggc
gtgcgcatcgacggacgtggccccaaggacatccgggcactgtccagcgaggtgggcgtc
gtcccgcgcgtgcatggttccggactgttccagcgcggcgagacccaggtactgggcatc
accacgctgaacatgctcgacatggagcagaagctcgacaccctgagctcggtgcacacg
aagcgctatatgcaccaatacgagatgccgccctactcgaccggcgagaccggtcgtgtg
ggttccccgaagcgccgcgaggtgggccatggtgctctggcatcccgggccatcgtcccg
gtgctgccgacgcgcgaggaattcccctacgcgatccgccaggtcagcgaggcgatcggt
tcgaacggttccacctcgatgggttcggtctgcgcctcgacgctgtcgctgctcaacgcc
ggcgttccgctcaaggccccggtcgcgggtatcgcgatgggcctgatgagtgagaccgac
gagtcgggcaagacgagctacctcgccctgaccgacatcctgggagccgaggacgccctg
ggcgacatggacttcaaggtggccggcaccagcgagttcgtcacggcgctgcagctcgac
acgaagctgaatggcattcccgccgacgtgctggccgctgccctgctgcaggcccgcgac
gcgcgccacgccatcctcgacgtgatccacgatgcgatcgacagccccgatgagatgagc
ccctatgcgccgcgcatcatcaccgtgcacattcccaccgacaagatcggcgaggtgatc
gggcccaagggcaaggtcatcaaccagatccaggacgacacgggcgccaacatctcgatc
gaggaggacggcaccatttacgtgggcgccgacaatggcgatgccgccgaggccgcacgc
acgatgatcaatgcgatcgccaacccgacgatgcccgagcgcggcgagcgctacctcggc
accgtggtgaagctgaccagcttcggcgcattcatctccctgctgccgggcaaggacggg
ctgctgcacatcagcaagctgcgcgccctcaacgacggcaagcgtgtggagaacgttgag
gacgtgctctccgtgggccagaagctgcaggtcgagatcagcgacatcgatgatcgcggc
aagctgtcactggttcccgtgctcgacgaggacgactccgacgacgagtga
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