Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_17090
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Entry
PFREUD_17090 CDS
T01252
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Pathway
pfr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFREUD_17090 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfr03400
]
PFREUD_17090 (ung)
Enzymes [BR:
pfr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PFREUD_17090 (ung)
DNA repair and recombination proteins [BR:
pfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PFREUD_17090 (ung)
Prokaryotic type
PFREUD_17090 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CBL57220
UniProt:
D7GFA9
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All DBs
Position
1868192..1868881
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AA seq
229 aa
AA seq
DB search
MNAQPIAQLMAPDWAAALAPQEPQIHAMGEFLRGEIAAGRGYLPDGDKVLRAFSRPMADV
RVLIVGQDPYPTPGHPIGLSFAVNRDVRPLPRSLVNIYQELSSDLGIPPAPHGDLTGWFD
QGVLLLNRCLTVRPGHPASHRGKGWEPVTQAAIEALVARGGPLVAILWGRDAQSLTPMLQ
AGGVPIIASPHPSPLSARSGFFGSRPFSRANAALVGAGAQPIDWDLNER
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcccagcccatcgcccagctcatggcgcccgattgggctgccgcgcttgctccc
caggaaccccagatccacgccatgggggaattcctgcgcggcgagatcgcggccgggcgg
ggataccttcccgatggcgacaaggtgctgcgggccttcagccgtccgatggccgacgtg
cgggtgctcatcgtcggccaggacccctatccgacgccggggcatccgatcggcctgagc
ttcgcggtgaatcgcgacgtccgcccgctgccgcgcagcctggtgaacatctaccaggaa
ctgagctccgacctggggatcccgccggcaccacacggcgacctgaccggctggttcgat
cagggcgtactgctgctcaacaggtgcctcacggtgcggccgggccatcccgcgtcgcac
cggggcaagggatgggaaccggtcacccaggccgcgatcgaggcgctcgtcgcgcggggc
ggacccctggtcgccatcctgtggggacgcgatgcccagtcgttgacgccgatgctgcag
gccggcggcgtgccgatcatcgcctcaccgcaccccagcccgctgtcggcccgttccggg
ttcttcgggtccaggcccttcagccgcgccaacgcggcactcgtcggggccggcgcccag
cccatcgactgggacctgaacgagcgctga
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