Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_23000
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Entry
PFREUD_23000 CDS
T01252
Symbol
PPA2234
Name
(GenBank) Putative long-chain-fatty-acid--CoA ligase/synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Pathway
pfr00061
Fatty acid biosynthesis
pfr00071
Fatty acid degradation
pfr01100
Metabolic pathways
pfr01212
Fatty acid metabolism
pfr02024
Quorum sensing
pfr04146
Peroxisome
Module
pfr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pfr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PFREUD_23000 (PPA2234)
00071 Fatty acid degradation
PFREUD_23000 (PPA2234)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PFREUD_23000 (PPA2234)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFREUD_23000 (PPA2234)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pfr01004
]
PFREUD_23000 (PPA2234)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfr04147
]
PFREUD_23000 (PPA2234)
Enzymes [BR:
pfr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PFREUD_23000 (PPA2234)
Lipid biosynthesis proteins [BR:
pfr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PFREUD_23000 (PPA2234)
Exosome [BR:
pfr04147
]
Exosomal proteins
Exosomal proteins of breast milk
PFREUD_23000 (PPA2234)
Exosomal proteins of breast cancer cells
PFREUD_23000 (PPA2234)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
CBL57810
UniProt:
D7GGZ9
LinkDB
All DBs
Position
complement(2476182..2478188)
Genome browser
AA seq
668 aa
AA seq
DB search
MTDLRELPSQPLAVEPAHVGLMVKASVQAFGDRPATRVLVGKRWVVASYRELDARAMQIA
AALMYSGVEKGDRVGFYSRNRPEWTQVDLACQFIGAVSVPIYATDTVDEVVHIANDCGMV
VAFAGRADEAERMGQASERIPSLRRVISFDSCPRTDVTWLEYFAPSDRPVPEQVVSRINA
RLNKASGDDLFSIIYTSGTTGAPKGVKLAHRAIMSELGALHRSFPISTRDHSLCFLPLSH
ALERGWTCYLWAHGCMNTYVVDTRNVGEMMRRARPTLMVAVPKLFETVLAEVHKASAVTP
RRKRILQWAVSVGQHLQFDYRQGRKPLLFWRAQLPLADRLVLRKIREAMGGQKTMLVSGG
APLRRETELFFGAAGLQILNGYGMTEAAPLISYNTHSAYRVGSMGRVMPGGRIKLGDKHE
ILYQGPNVMDGYWDNEEATREAFLTDDEGTWLRTGDVGRIDRRGFLFVTDRLKDIIVTEG
GKNISPQPIEELLQSDPMFEHVVVLGDNRPFLTLLVQPSMANLQKLAEALHIDYGHVSEL
FNNQNILDEIKKSAEALTKNLPKYQQVRDLRMSSEGFSIANGLLTPTLKVKRREVERRFR
GLIDEMYTKIGLHHDPKSASGRDPKSASGRDSRSASGRDSGTASGGDRGRTHGQAPRSTR
GGDSPTAR
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcttcgcgaactgccgtcacagccattggcggtcgagccggcgcacgtcggc
ctgatggtgaaggcgagtgtgcaggccttcggtgaccgtcccgccacgcgcgtgctggtg
ggcaagcgatgggtggtggccagctaccgcgagctcgacgcccgcgccatgcagatcgcc
gcggcgctcatgtactccggtgtcgagaagggcgaccgggtgggtttctactcgcgcaat
cgccccgaatggacccaggttgacctggcgtgccagttcatcggcgccgtctcggtgccc
atctacgccaccgacaccgtcgatgaggtggtgcacatcgccaatgactgcggcatggtg
gtggcgtttgccggacgcgccgacgaggccgagcggatgggtcaggcgtccgaacgcatc
ccgagcctgcgccgggtgatcagcttcgacagctgcccgcgcaccgatgtcacctggctc
gaatactttgcgccgagcgatcgcccggtgcccgagcaggtggtctcgcgcatcaacgcc
cgactcaacaaggccagcggcgacgacctcttctcgatcatctacacctccggcaccacg
ggcgccccgaagggcgtcaagctggcgcaccgggccatcatgtcggagctgggtgccctg
caccgcagcttcccgatcagcacccgcgaccattcactgtgcttcctgccgctgtcgcat
gccctggagcgcggctggacctgctacctgtgggcgcacggctgcatgaacacctatgtg
gtggacacccgcaacgtcggcgagatgatgcgccgggcgcgtccgacactgatggttgcg
gtgcccaagctgttcgagaccgtgctcgccgaggtgcacaaggcgtcggcggtcacgcca
cgacgcaagcgcatcctgcagtgggcggtcagcgtgggccagcacctgcagttcgactac
cggcagggccgcaagcccctgctgttctggcgcgcccagctaccgctggccgatcgcctg
gtgctgcgcaagatccgggaggccatgggcggccagaagacgatgctggtcagcggcggg
gcacccctgcgtcgcgagaccgaactgttcttcggggcggccgggctgcagatcctcaac
ggttatggcatgaccgaggcggcgccgctcatctcgtacaacacgcacagtgcgtaccgg
gtgggcagcatgggacgcgtgatgcccggcgggcgcatcaagctcggcgacaagcacgag
atcctctaccagggccccaatgtgatggacggctactgggacaacgaagaggcaacccgc
gaggccttcctcaccgatgacgagggcacctggctgcgcaccggcgacgtgggacgcatc
gaccgtcgcggcttcctgttcgtcaccgaccggctgaaggacatcatcgtcaccgagggc
ggcaagaacatctcgccccagccgatcgaagagctgttgcagtccgatccgatgttcgaa
cacgtggtggtgctgggcgacaaccggcccttcctcacgctgctggtgcagccgtcgatg
gccaacctgcagaagctggccgaggcgttgcacatcgactacgggcatgtcagcgagctg
ttcaacaaccagaacatcctcgatgagatcaagaagagcgccgaggcgttgaccaagaac
ctgccgaagtaccagcaggtccgcgacctgcggatgagcagtgaggggttcagcatcgcc
aacgggctgctgacgccgacgctcaaggtgaagcgccgtgaggtggagcgtcgcttccgt
gggctgatcgacgagatgtacaccaagatcggcctgcaccatgatcccaagtccgcctcc
ggcagggaccccaaatctgcctccggcagggattctcggtctgcctccggcagggattca
gggacggcctcgggcggggaccgcgggcgcacccacgggcaggccccccggtccacccgc
ggcggggattcgcccaccgcgcgctga
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