Candidatus Phytoplasma fraxini: AshY1_00160
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Entry
AshY1_00160 CDS
T10424
Name
(GenBank) LSU rRNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pfra Candidatus Phytoplasma fraxini
Brite
KEGG Orthology (KO) [BR:
pfra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfra03009
]
AshY1_00160
Enzymes [BR:
pfra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
AshY1_00160
Ribosome biogenesis [BR:
pfra03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AshY1_00160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
HTH_17
Motif
Other DBs
NCBI-ProteinID:
WYY26173
LinkDB
All DBs
Position
complement(18980..19879)
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AA seq
299 aa
AA seq
DB search
MKILVVQDKEKNLRLDLFLKQKLKITRNHCYSLIRSGEVFVNDVKELKKSYLVKENDIIK
VPIIEPKNLIKGFKPINLNLKIIYEDQYLAIIDKPYDLIVHPSHSYSGITLINGLYYQMK
DFLISDKDNDRPGIVHRLDKDTTGLIIIGKTEEAVTKLQNLIRQRGIQRIYWAIVYGYLG
YDYGKIDLPIKRSTHNRLKMEVSFSGKPSVTHFQLLKKLQDFSLLELKLETGRTHQIRVH
LSYLKHPIYGDCLYSNKQQAISQQMLHAKKLDFIHPFTHKQLQFEIPLSLHFQKFLDNF
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattggttgtacaagataaagaaaaaaatttacgcttagatctttttttaaaa
caaaaattaaaaattactagaaatcattgttattctttgattcgttcaggtgaagtgttt
gttaatgatgtcaaagaattaaaaaaaagttatcttgttaaagaaaatgatataataaaa
gtgccaattattgaaccaaaaaatttaataaaaggttttaaacctattaatttgaattta
aaaataatttatgaagatcaatatttagctatcatcgataaaccttatgatttgatagtt
catccttctcatagttattcaggtatcactttaattaatgggttatattatcaaatgaaa
gattttctaatttcagataaagataatgataggcctggtattgtgcatcgtttagataaa
gatactacaggtttaattattatcggaaaaacagaagaagcagtaactaagttacaaaat
ttaattcgtcaaagaggtattcaaagaatttattgggctattgtttatggttatttaggt
tatgattacgggaagattgatttacctatcaaaagaagtacacataatcgtttaaaaatg
gaagtttctttttcaggaaaaccttctgttacccattttcaacttttaaaaaaattacaa
gatttttcgctcttagaattaaaattagaaacaggacgcacacatcaaattagagttcat
ttgtcttatttaaaacacccaatttatggtgattgtttatacagcaataagcaacaagcg
atatctcaacaaatgttacatgctaaaaaattagattttattcatccttttactcataaa
caattacaattcgaaattcctttgtctttgcattttcagaaatttttagataatttttaa
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