Candidatus Phytoplasma fraxini: AshY1_00270
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Entry
AshY1_00270 CDS
T10424
Name
(GenBank) DNA-directed RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
pfra Candidatus Phytoplasma fraxini
Pathway
pfra03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pfra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AshY1_00270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfra03021
]
AshY1_00270
03400 DNA repair and recombination proteins [BR:
pfra03400
]
AshY1_00270
Enzymes [BR:
pfra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AshY1_00270
Transcription machinery [BR:
pfra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AshY1_00270
DNA repair and recombination proteins [BR:
pfra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AshY1_00270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF7437
DUF7409
Motif
Other DBs
NCBI-ProteinID:
WYY26183
LinkDB
All DBs
Position
33529..33744
Genome browser
AA seq
71 aa
AA seq
DB search
MYKEKKEGLNYPSIDELLKVIDSKYKLSYVSAKIAHVMETEQLDVSDIEGKKILSKALSE
IINNNFEIVFK
NT seq
216 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagaaaaaaaagaaggtttgaattatccttctatcgacgaattattaaaagta
attgattctaaatataaattatcttatgtatctgctaaaatcgctcatgttatggaaact
gaacaattagatgtttccgatattgaaggtaaaaaaatattaagtaaagctttatcagaa
attattaataataattttgaaattgtgtttaaataa
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