Candidatus Phytoplasma fraxini: AshY1_01980
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Entry
AshY1_01980 CDS
T10424
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
pfra Candidatus Phytoplasma fraxini
Brite
KEGG Orthology (KO) [BR:
pfra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfra03032
]
AshY1_01980
03036 Chromosome and associated proteins [BR:
pfra03036
]
AshY1_01980
03400 DNA repair and recombination proteins [BR:
pfra03400
]
AshY1_01980
DNA replication proteins [BR:
pfra03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AshY1_01980
Chromosome and associated proteins [BR:
pfra03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AshY1_01980
DNA repair and recombination proteins [BR:
pfra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AshY1_01980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
COMMD9_HN
DUF6710
Motif
Other DBs
NCBI-ProteinID:
WYY26334
LinkDB
All DBs
Position
175516..175815
Genome browser
AA seq
99 aa
AA seq
DB search
MNKSKLISKISEELDVKKDQAKKFLNCLNKIVKDSLKEEKKNNPYAKVIKVIIGDLGAVH
LKHRKERICKVPKSNKVLTIPAQDVPVFKMSKKIKDFFK
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcaaaattaattagtaaaatatctgaagaattagatgttaaaaaagatcaa
gctaagaaatttttaaattgcttaaacaaaatagtgaaagacagtttaaaagaagaaaaa
aaaaataatccatatgctaaagtgattaaggttattattggtgacttaggcgctgttcat
ttaaaacataggaaagaaagaatttgcaaagtacctaaaagtaataaagttttaactatt
ccagcacaagatgtaccagttttcaaaatgagcaaaaaaattaaagatttttttaaataa
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