Candidatus Phytoplasma fraxini: AshY1_02560
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Entry
AshY1_02560 CDS
T10424
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pfra Candidatus Phytoplasma fraxini
Pathway
pfra03030
DNA replication
pfra03430
Mismatch repair
pfra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AshY1_02560
03430 Mismatch repair
AshY1_02560
03440 Homologous recombination
AshY1_02560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfra03032
]
AshY1_02560
03400 DNA repair and recombination proteins [BR:
pfra03400
]
AshY1_02560
Enzymes [BR:
pfra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AshY1_02560
DNA replication proteins [BR:
pfra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AshY1_02560
DNA repair and recombination proteins [BR:
pfra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AshY1_02560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
RuvB_N
AAA_5
AAA_22
RCF1-5-like_lid
AAA_18
AAA_2
nSTAND3
AAA_assoc_2
AAA_16
RNA_helicase
TsaE
AAA_24
DNA_pol3_gamma3
sCache_2
Mg_chelatase
IspD
Motif
Other DBs
NCBI-ProteinID:
WYY26387
LinkDB
All DBs
Position
226639..228366
Genome browser
AA seq
575 aa
AA seq
DB search
MKYIALYRKHRPKNFQNIVGQTIIIQTLKNAIKYQKIHHCYLFSGNKGVGKTTLAKVLTK
AINCSFFLKQEDCCDIHNNENCCEFCLSIDQNKTLDFIEIDGASYSGVDDIRELKDKLFY
KSDFLKYKVYIIDEIHVLSPNAFNALLKVLEEPSPNVIFILITSEYHKIPENLFSRTQYF
YLNNISSQDIQKKIKSISNIEKISISDAAVNKISSYSRGSLRDALNVLDQVSSYKNDIIE
EKDVLEILELVSEENIHKLSQVLFQNNIKNLITFLENILTPNTNYVLFLNDFVNFFQKQV
IHYFKNNDDSFVVWSNFDYQSRDKILQKLFELQNNLTLSQNKRNFLIIGFIQINHFVFSL
NQVPKMSYSNEKQINLSKTQLNINIQKQKFLDDTSFISNIQVKENNLSTFKKNFVFNIIN
ILNNSDIITKELICKGWRKLQNYPISKLSHTARLLYNSQFLMINFNKEILLSCRDDIEYG
QFLKHDIRNEIKQILNAKKTLIKEYFVILNKDWENIIKPVYLKFLKTKKKEDLDLSLFKT
DFYEINSSLNIEQNQLIIVKLARRLFASDDLEIIN
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatatagctttatatcgaaaacataggcctaaaaattttcaaaatatagttggt
caaacgattattatacaaactttaaaaaacgctattaaatatcaaaagattcatcattgt
tatttgtttagtggtaataaaggagttggaaaaactaccttagctaaagttttaactaaa
gctataaattgttctttttttttaaaacaagaagattgctgcgacattcataataacgag
aattgttgtgaattttgtttgtctatcgaccaaaataaaactttagattttattgagatt
gatggtgcctcttatagcggcgtggatgatatacgtgaattaaaagataaattattttat
aaatctgattttttgaaatataaagtatatattattgatgagattcatgttttatctccc
aatgcttttaacgctttattaaaagttttagaagaaccatccccgaatgttatttttatt
ttaattactagcgaatatcataaaattcctgaaaatttgttttcacgtacacaatatttt
tatttaaataatatttcttctcaagatattcaaaagaaaataaaatcaatttctaatatt
gaaaaaatatctatatctgatgcagctgtaaataagatttcttcttattctcgaggtagt
ttaagagatgctttaaatgtattagatcaagttagttcttataaaaatgatattattgaa
gaaaaagatgttttagaaatattagaacttgtttctgaagaaaatattcacaaattatct
caagttttatttcaaaataatataaaaaaccttattacttttttagaaaacatcttaact
cctaatacaaattatgtgctttttttgaatgattttgttaatttttttcagaaacaagtt
attcattattttaaaaataatgatgatagttttgttgtttggtctaattttgattatcaa
tcaagagataaaattttacaaaaattattcgaattacaaaataatttgacattatcccaa
aataagagaaattttttaattattggttttattcaaattaatcattttgtattttcacta
aatcaagtaccaaagatgtcatattcaaacgaaaaacaaattaatttgtcgaaaacacaa
ttaaatataaacatacaaaaacaaaaatttttggacgatacgtcttttatatctaatatc
caagtcaaagaaaataatttatcaacatttaaaaaaaattttgtatttaatattattaat
attttaaataattctgatattatcactaaagaattaatttgtaaaggatggcgaaaatta
caaaattatcctatttctaaattatctcatactgctagattattatataattcacaattt
ttaatgataaattttaacaaagaaattcttttatcgtgtagagatgatatagaatatgga
caattcttaaaacatgatatcagaaatgaaattaagcaaattttaaatgcaaaaaaaaca
ttaataaaagaatattttgtgatcttaaataaggattgggaaaatataataaaacctgtt
tatttaaaatttttaaaaactaaaaaaaaagaagatttagatttatctctttttaaaact
gatttttatgaaataaattcttctttaaatattgaacaaaatcaattaattattgtaaag
ttagctaggcgtttgttcgcttctgatgatttagaaattattaattaa
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