Candidatus Phytoplasma fraxini: AshY1_02680
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Entry
AshY1_02680 CDS
T10424
Name
(GenBank) 3'->5' exoribonuclease Bsu YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pfra Candidatus Phytoplasma fraxini
Brite
KEGG Orthology (KO) [BR:
pfra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfra03019
]
AshY1_02680
Messenger RNA biogenesis [BR:
pfra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AshY1_02680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
WYY26399
UniProt:
A0ABZ2U7Y3
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All DBs
Position
242031..242969
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AA seq
312 aa
AA seq
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MNQNLFLQNKKINDKITFIGKIISLNKGEHFCNIDFLLMENFNVNIKIDSVFDIPQKDKL
YVFETAYQQNKNNKNVLICLKYSLIENNLNLEQIYHCYNHFFTCTNIPFHVIDQQITNFL
SNIKNPIFKKITQNIYSKYKINFLISPAACKMHHAYYGGLSHHTLSILKISNHYLELYPF
LNKDLLQCGIILHDMAKIQEFTFETKSYTKQGVLLGHLILGVNNIHEEALLLGFQDKEEI
LLLKHLIIAHHGLLQYGAFKEPQIGEALLLWYLDDLDAKLNTLKEEIEKTEKGKFTENLP
VIKGKSFYKPDL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaacttatttttacaaaataaaaaaataaatgataaaatcacttttattgga
aaaataattagccttaataaaggcgaacatttttgtaatattgactttttattaatggaa
aattttaatgtaaatatcaaaatagattctgtttttgatattcctcaaaaagacaaactt
tatgttttcgaaacagcatatcaacaaaataaaaacaataaaaacgttttaatatgtctt
aaatattctttaatcgaaaataatttaaatttagaacaaatttatcattgttataatcat
ttttttacgtgcacaaatattccttttcatgtcatagatcaacaaataactaatttttta
tctaatatcaaaaatcctattttcaaaaaaataactcaaaatatttattctaaatataaa
ataaattttttaatttcaccagctgcttgcaaaatgcatcatgcttattacggtggttta
agccatcatactctaagtatattgaagatatctaatcattatctagaattatatcctttt
ttaaataaagatttattacaatgtggtattattcttcatgatatggctaaaatacaagaa
tttactttcgaaacgaaaagttataccaaacaaggcgttttattagggcatttaatttta
ggagttaataatatccatgaagaagctcttttattagggtttcaagacaaagaagaaatt
ttgcttttaaaacatttaataattgcacatcatggtttattacaatatggtgcgtttaaa
gaacctcaaatcggcgaagctcttttattatggtatttagacgatttagatgctaaatta
aatactttaaaagaagaaatagaaaaaactgaaaaaggaaaatttactgaaaatttacct
gtaataaaaggaaaatctttttataaaccagatttatga
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