Candidatus Phytoplasma fraxini: AshY1_04580
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Entry
AshY1_04580 CDS
T10424
Name
(GenBank) tRNA-5-carboxymethylaminomethyl-2-thiouridine(34) synthesis protein MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pfra Candidatus Phytoplasma fraxini
Brite
KEGG Orthology (KO) [BR:
pfra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfra03016
]
AshY1_04580
Transfer RNA biogenesis [BR:
pfra03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
AshY1_04580
Prokaryotic type
Methyltransferases
AshY1_04580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
AIG1
RsgA_GTPase
Ras
Dynamin_N
AAA_29
Roc
AAA_7
AAA_24
Cas9_PI_C
Motif
Other DBs
NCBI-ProteinID:
WYY26565
UniProt:
A0ABZ2UDV4
LinkDB
All DBs
Position
complement(466526..467899)
Genome browser
AA seq
457 aa
AA seq
DB search
MIIYDNIAAIATPLGSGSINVIRVSGPKVIQNINQIFKSSKRNFDLSQAPSHTIHHGFIL
DQNQNILDEVLISIFKNPHSFTGEDVVEVQGHGGILITQLLLERILSLDIRLSEPGEFSK
RAFLNGKIDLIQAESIMDLIFAQNENAIKLANLGLQKKNSKLIEDLSNKIIKIIGQIEVN
IDYPEYLDIEEITNQIILPQIKQLIYKMEEILNLYTQNRLLKNGIKTLIIGKPNVGKSSL
LNVLLQNNRAIVSDIAGTTRDYVDGYVDIKGVSLCLIDTAGIRETKDPLEQIGVEKSRKL
LKEAELVLLLLDQSNVLDKDDQILLDLTKEYSRIIIGSKSDLPNKLNLSQIKEEMILLSS
YNQEGIEELKNKILTKFQLDNLQNTEFNYCLNARHIKEIQIALNSLQNIIIDIQKKMPID
IHTINLKEAYNALGNILGTNIPEHLLNELFSNFCLGK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgattatttatgataatattgctgctattgcaacccctttaggaagtggtagtattaat
gttataagagtgagtggacctaaagttattcaaaatattaatcaaatttttaaaagttct
aaaagaaattttgatttatctcaagccccttcgcatactattcatcacggttttatttta
gatcaaaaccaaaatatattagatgaagtattaatttctatttttaaaaatcctcattct
tttactggcgaagatgttgttgaagtccaaggtcatggagggattttaataactcaatta
ttattagagagaattttatcattagatattagattatccgaaccaggagaatttagtaaa
agagcttttttaaatggcaaaatagatttgatacaagcggaatcaattatggatttgatt
tttgctcaaaacgaaaacgctattaaattagcaaatttaggtttgcaaaaaaaaaattct
aaattaatagaagatttaagtaataaaatcattaaaataataggccagatagaagtcaat
attgattatcctgaatatttagatattgaagaaattactaatcaaataattttacctcaa
attaaacaattgatttataaaatggaagagattttaaatttgtatactcaaaaccgtttg
ttaaaaaacggtattaaaactttaatcattggaaaacctaatgtaggaaaatctagttta
ttaaatgttttgttgcagaacaacagagctattgtttctgatattgctggtactactcgt
gattatgtagatggatatgttgatattaaaggtgtttctttatgtttaattgataccgca
ggtattcgcgaaactaaagatcctttagagcaaataggtgttgagaaatctcgcaaactt
ttaaaagaagcagaattagttttgttgttattagatcaaagcaatgttttagataaagat
gatcaaatattgcttgatttaactaaagaatattctagaattataataggtagtaaatct
gatttaccgaataaattgaatttaagtcaaattaaagaggaaatgattttattatctagt
tataatcaagagggcattgaagaattaaaaaataaaattttaacaaaattccaattagat
aatctacaaaatacagaatttaattattgtttaaatgcaagacatattaaagaaatacaa
atcgctttaaactctttacaaaatattattatagatattcaaaaaaaaatgcctatcgat
atacacacaataaatttaaaagaagcttataatgctttaggaaatattttaggcacaaat
atcccagaacatttactgaacgaattattttctaatttttgtttaggcaaataa
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