Candidatus Phytoplasma fraxini: AshY1_05060
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Entry
AshY1_05060 CDS
T10424
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pfra Candidatus Phytoplasma fraxini
Pathway
pfra03030
DNA replication
pfra03430
Mismatch repair
pfra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AshY1_05060
03430 Mismatch repair
AshY1_05060
03440 Homologous recombination
AshY1_05060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfra03032
]
AshY1_05060
03400 DNA repair and recombination proteins [BR:
pfra03400
]
AshY1_05060
Enzymes [BR:
pfra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AshY1_05060
DNA replication proteins [BR:
pfra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AshY1_05060
DNA repair and recombination proteins [BR:
pfra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AshY1_05060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
WYY26611
LinkDB
All DBs
Position
complement(520002..522683)
Genome browser
AA seq
893 aa
AA seq
DB search
MIGVFYLQSNYSIMESIPSVEVLVRKAKENNYRFVALSDNENLHGIVEFFDICQKYKIKP
ILGIKIYLALNDIIGQNKQIGVLIYALNDVGINNLIQISNWIRTNSQKMTLTTLKQFQEG
LFFILSNVDFFLSDISDLNLIEKIFVQLKNNFNLFFFGLSLQSDFLELFAHNILALVVEK
LKISAVVVHKTNFLESSQREAHQLLLQLMYPSKDLDMSFQFLTQQEIDIKYQSYYDEYKE
SFLDLESFIAPIQYLNIFPSDLTLPKFSQISQESSADYLEKITYAFLKEKIPISLSQFSF
YDERLKKELKIIKDMHYEDYFLIVFDLLRYAKNEGILLGPGRGSSAGSLVCFCLGITEAD
PLLYNLLFERFLNSKRNKKPDIDLDFPDNKINIILKYIYDKYGPSYTANIITFNTLTKKS
FLQNTNYIRYQKEFLKTSKLDEQQKKILGQLEGLPQFTSTHPSGVIISNKDLTKYLPVQN
NPQSNSPLRYQTQIEDRYLSKIGLPKIDVLSLKSLTLIDKILKEINVDNKETINWHQIPF
DDKLTYQLLQKGDTKYIFQLESLMAQKVLQKVKPEKIEDLAAALALNRPGQINYIDSYCR
HKQEQQNFLVDKETYQYLQNILKNTHGLILYQEQIMEIAFSFAGYDFSEAEIFTKYIIQK
SDSDDKEQKIIRTEFIKCSQQKGHSEKIAASVYDYILKFSNYSFNKSHSVSYSLISYRMA
YLKTHYFYLFAKVLLEEYQKIPSETEDLLKKIQKNNKIQIIVPNIFKSGLKYELIEGKLL
LPLISIKNVNEEIALFIMKERKIKKFVNFYDFKNRCQKVLNNDLLRSLVLAGAFSDFGLN
KNTLLNESNLEYLEHEEYLLPFKKQIFLKEFSEEYLKQEMNKIFGFDLKTLLL
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgataggtgttttttatttacaaagtaattatagtattatggaaagcattccttctgta
gaggttttggtaaggaaagctaaagagaataattatcgttttgtggctttgagcgataat
gaaaatttacacggcatagtggaattttttgatatttgtcaaaaatataaaataaaacct
attttaggaataaaaatatatttagcattaaatgatattattggtcaaaataaacaaatt
ggagtcttaatttacgctttaaatgacgtcggcattaataatttaattcagatttctaat
tggataagaactaattctcaaaaaatgactttaacaactttaaaacaatttcaagaaggg
cttttttttattttaagtaatgtagatttttttctttctgatatttcggatttaaatttg
atagaaaaaatttttgttcaattaaaaaataatttcaatttgtttttttttggtttatct
ttacaatcagactttttagaattatttgcgcataatattttagctcttgtagtagaaaaa
ttgaaaatttcagcggtagttgttcataaaacaaattttttggaatcttctcaaagagaa
gctcatcaattattactccaattgatgtatccttctaaagatttggatatgtcttttcaa
tttttaactcaacaagaaatagatattaaatatcaaagttattacgatgagtataaagaa
tcttttttagatttagagtcttttattgcacctattcaatatttaaacatttttccttca
gatttaacattacctaaattttctcaaatatcacaagaatcgtctgctgattatttagaa
aaaataacatatgcttttttgaaagaaaaaattccgatttcattgtctcaattttctttt
tacgatgaaagattaaaaaaagaattaaaaattatcaaagatatgcattatgaggattat
tttttgattgtttttgatttattgcgttatgctaaaaatgaaggtattttattaggaccg
gggagaggttcttcagctggttctttagtttgtttttgtttaggtattacagaagcggat
cctttactttataatcttctttttgaaaggtttttaaattctaaaagaaataaaaaacca
gatatcgatttagattttccagataataaaataaacattattttaaaatatatttatgat
aaatatggcccatcgtatacagctaatattattacttttaacactttaactaaaaaatct
tttcttcaaaatactaattatattcgatatcaaaaagaatttttaaaaacatcaaaactt
gatgaacaacaaaaaaaaattttaggtcaattagaagggttaccgcaatttactagcact
cacccatctggtgttattattagtaataaggatttaacgaaatatcttcctgttcaaaat
aatcctcaaagtaattctcctttgcgatatcaaactcaaatagaagatcgatatttatcc
aagataggtttgcctaaaatagatgttttaagtttaaaaagtttgactttaattgataaa
atcttaaaagaaattaacgttgataataaagaaacaataaattggcaccaaattcctttt
gatgataaattgacttatcaattattacaaaaaggcgatactaaatatatttttcaatta
gaatctttaatggctcaaaaagtgttacaaaaagtcaaaccagaaaaaattgaagatttg
gctgctgctttagctttgaatagaccaggacaaatcaattatattgattcttattgccgt
cataaacaagagcagcaaaattttttagttgacaaagaaacttatcaatatttacaaaat
attttaaaaaatacgcacggtcttattctttatcaagaacaaattatggaaatagctttt
tcttttgctggttatgattttagtgaagcagaaatatttacaaaatatataattcaaaaa
tctgatagcgatgataaagaacaaaaaataattagaacagaatttattaaatgtagtcaa
caaaaaggacattctgaaaaaatagctgctagtgtttacgattatattttaaaattttct
aattatagttttaataaaagtcatagtgtttcttattctttgattagttatcgcatggct
tatttaaaaactcattatttttatctttttgcaaaagtacttttagaagaatatcaaaaa
ataccttccgaaacagaagatttattgaaaaaaattcaaaaaaataataagattcagatt
atagttcctaatatttttaaaagtggtcttaaatatgagttaattgaaggaaaattatta
ttgcctttgatttcgattaaaaatgtaaatgaagaaatagctttatttataatgaaagaa
agaaagataaaaaaatttgtgaatttttatgattttaaaaatagatgtcaaaaggtttta
aacaatgatttgttaagaagtttagttttagcaggtgcttttagtgatttcggacttaat
aaaaatactttattaaatgaatctaatttagaatatttagaacatgaagaatatttatta
ccttttaaaaaacaaattttcttaaaggagttttctgaagaatatttaaaacaagaaatg
aataaaatttttggttttgatttgaaaactttgcttttatga
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