Candidatus Phytoplasma fraxini: AshY1_05110
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Entry
AshY1_05110 CDS
T10424
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pfra Candidatus Phytoplasma fraxini
Pathway
pfra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AshY1_05110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfra03019
]
AshY1_05110
03016 Transfer RNA biogenesis [BR:
pfra03016
]
AshY1_05110
Enzymes [BR:
pfra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AshY1_05110
Messenger RNA biogenesis [BR:
pfra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AshY1_05110
Transfer RNA biogenesis [BR:
pfra03016
]
Prokaryotic type
tRNA degradation factors
AshY1_05110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
Motif
Other DBs
NCBI-ProteinID:
WYY26616
LinkDB
All DBs
Position
complement(529515..531635)
Genome browser
AA seq
706 aa
AA seq
DB search
MTAKVFKTIFENNLLSVEINNLARQANSSVLLRYKDNVILTVSVASRKDTDLNYFPLTVI
YQEKLYAVGKIPGSFTKREGKSSDHEVLKSRLIDRTLRHLFSKNLKKEIQIINTILSSDY
DCNNEMFAILASSLSLIVSDIPFVESVAGVCIGRIDNELIINPSSDKREKSDFLLTLSGT
KQSLNMIELIAAETTEEELQETMVYGHDIIKKLCIFQDEIRDKINPQKQLLVEPEINENL
YKQIREKYTNSIKNILEINAQQKRDSKIFKKDINQLKETLLLEYKDIDNVTILEIENIVS
RLLSQEFRKMVIEDKKRIDGRELDEIRTIESQVGFLPRVHGSALFTRGQTQSLVAVTLGT
LKESKMIDDLTEEEEKIFLLHYNFPAFSVGEVGRYMAPSRREIGHGILAEKALFYLLPSE
QEFPYSIRAVSEILESNGSSSQATICAASMALMDAGVPLKKAVAGVAMGLFCDDTQCVVL
TDIQGLEDHEGDMDFKVAGTEKGITALQMDTKRQDITFNILKTLLQKARLARLKILKKMN
QVISKNKKEVSIYAPKVKIINIPIDKIRDIIGAGGKIISRIIEQHDDVKIDIKQDGKIFI
THINIDIVEKTANYILNLVKNIEINEIYDVTVLKILTNNQGQSFAAVVEIFQNIEGFIHI
SQLSHTKTKFVEDVLNVGDKVLAKCIEINNKGKIFLSLRDVEQKKI
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgactgcaaaagtatttaaaactatttttgaaaataatttattaagtgttgaaataaat
aatttagctagacaagctaattcttctgtattacttcgttataaagataatgttatttta
actgtatcagttgcaagtcgaaaagatactgatttaaattattttccattaacagttatt
tatcaagaaaaactttatgctgtagggaaaatacccggaagttttactaaaagagaagga
aaatcttctgatcatgaggttttaaaatctcgattaatagataggactttaagacattta
ttttctaaaaatttaaaaaaagaaattcaaatcattaatactattttaagtagcgactat
gattgcaataatgagatgttcgctattttagctagttctttgtctttgattgtatcggat
attccttttgtagaatctgttgcaggtgtttgcataggcagaatagataatgagttaatt
attaatcctagttcagataaaagagaaaaatcagattttttattaactttatcaggtact
aaacaaagtttaaatatgatcgaacttattgccgcagaaacaacagaagaagaattacaa
gaaactatggtttatgggcatgatataataaaaaaactttgtatttttcaagatgaaatt
agagataaaataaatcctcaaaaacaacttttggtagaaccagaaattaatgaaaattta
tataaacaaattagagaaaaatatacaaattcaataaaaaatattttagaaataaatgca
caacaaaaaagagattccaaaatatttaaaaaagatattaatcagttgaaagaaacatta
ttattagaatataaggatattgataatgttacaattttagaaatagaaaatattgtaagt
cgtttgttaagtcaagaatttagaaaaatggttatcgaagataaaaagagaatcgatggt
agagaattagatgaaatcagaacaattgaaagtcaagtaggttttttacctagagttcat
ggttcagctctttttactagaggccaaacacaaagtttagtagctgttacattaggaact
ttgaaagaaagtaaaatgattgatgatttaacagaagaagaagaaaaaatttttctttta
cattataattttcccgctttttctgttggtgaagtaggtcgttatatggctccttctaga
agagaaattggacatggtattttagctgaaaaagcattattttatcttttaccttcggaa
caagaattcccttattctataagagcggtttcagaaattttagaatctaatggttcttct
tcacaagctactatttgtgctgcttcaatggctttaatggatgcgggtgtccctttgaaa
aaagctgtagcaggagtagctatgggtttgttttgtgatgatacacaatgtgttgtttta
actgatattcaaggtttagaagatcacgaaggggatatggattttaaagtagctggaact
gaaaaaggaatcactgctttacaaatggatactaaaagacaagatattacttttaatatt
ttaaaaacactattacaaaaagcacgtttggctaggttaaaaattttaaaaaaaatgaat
caggttatttctaaaaataaaaaggaagtatctatttatgctcctaaagttaaaattatt
aatattccaatcgataaaataagagatattataggtgcgggcggcaaaattatttctcgt
attattgaacaacatgatgatgttaaaatagatatcaaacaagatggtaagatatttata
actcatataaatattgatattgttgaaaaaacagctaattatattttaaatttagttaaa
aatattgagataaatgaaatttatgatgtaaccgttttaaaaattttaactaataatcaa
ggtcaatcttttgcagcagttgtagagatttttcaaaatattgaaggttttatacatatt
agtcagttatctcatacaaaaacaaaatttgttgaagatgttttaaatgtaggcgataaa
gttttagctaagtgtattgaaattaataataaaggtaaaatatttttatctttaagagat
gttgaacaaaagaaaatataa
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