Propionibacterium freudenreichii subsp. freudenreichii DSM 20271: RM25_0015
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Entry
RM25_0015 CDS
T03860
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pfre
Propionibacterium freudenreichii subsp. freudenreichii DSM 20271
Brite
KEGG Orthology (KO) [BR:
pfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfre03032
]
RM25_0015
03400 DNA repair and recombination proteins [BR:
pfre03400
]
RM25_0015
Enzymes [BR:
pfre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RM25_0015
DNA replication proteins [BR:
pfre03032
]
Prokaryotic type
DNA Topoisomerases
RM25_0015
DNA repair and recombination proteins [BR:
pfre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RM25_0015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF3802
Motif
Other DBs
NCBI-ProteinID:
AJQ89751
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Position
22411..25146
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AA seq
911 aa
AA seq
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MSETPQGPGDNAETPTNNQRARKGSGVDAIAGPAKGRVDPVDLTSEIQNSFLDYAMSVIV
ERALPDVRDGLKPVHRRVIYTMYDGGYRPDRGWNKCSRVVGDVMGKYHPHGDSAIYDTLV
RLAQPWAMRYPLVSGQGNFGSPGNDGAAAMRYTECRMAPLAMEMVRDIDQGTVDFQPNYD
NRDTEPTVLPARFPNLLVNGSTGIAVGMATNIPPHNLREVNEAVQWFLEHPEASDEELLE
ASMARVKGPDFPNGALIVGRKGIEDAYRTGRGSVTMRAVINIEEDRKGRTELVVTELPYM
CNPDNLAQKIADLVNSGRLTGISDIRDDSSARTGQRLAIMLKRDAQPRVVMNNLYKHTQL
QDTFGCNMLALVDNVPRTLRLDQFIRYWVLHQIEVIVRRTEHQLQQAEKEAHIYRGLVKA
LDMLDEVIALIRRSPTTEQASAGLQKLLDIDDVQAAAILNMQLRRLAALERQKIIDKMKE
LDTLIADLKDILANRERQRSIVSNELGEIVGKYGDERRTQIIAAEGDFSDEDFIPDDDMV
VTITRGGYAKRTRTDQYRPQRRGGKGVRGATLRADDEVQHLFATTNHQWILFFTDHGRVY
RIKTWQLPEGGRDAKGGHVAGLLSFLPDEKIAQVLALRSYEDAEYLVLATKQGLVKKTAL
SAYDSPRQAGLIAVNFRADDDELIGAELVDASDDVLLISRLGQAIRFRADDEQMRPMGRT
TSGVTGMRFREGDELLSMSVVPAERGEASDEHADEEDEPLYVFTVTNGGFAKRTPVGDYR
VQNRGGLGIKAMRMDDERGHLVGGLVVTDSDEVIAIKASGQVTRSSVAEVNPTGRDTMGV
KFVGVRGKDEVIAIALNPEKPEEEGEGDETEPEATDEMGNAVPATDVIEADASEDGTAAA
DDDEDARASDE
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaacaccacaaggccccggcgacaacgccgagacgcccaccaacaaccagcgg
gcccgcaagggctccggcgtcgatgccatcgccggccccgccaagggccgcgtcgacccg
gttgacctcacctccgagatccagaactcgttcctcgactatgcgatgagcgtgatcgtc
gagcgtgccctgcccgatgtgcgcgacggcctcaagcccgtgcatcgccgcgtgatctac
acgatgtacgacggcggctatcgtcccgaccgcggctggaacaagtgctcgcgcgtcgtg
ggcgatgtgatgggcaagtaccacccgcacggcgactcggccatctacgacaccctggtg
cgcctggcccagccgtgggccatgcgctatccgctggtgtcgggccagggcaacttcggc
tcgcccggcaacgacggcgccgccgccatgcgttacaccgagtgccgcatggcgccgctg
gcgatggagatggtgcgcgacatcgaccagggcaccgtcgacttccagcccaactacgac
aaccgcgacaccgagcccaccgtgctgccggcgcgcttccccaacctgctggtcaacggg
tccaccggcatcgccgtgggcatggccaccaacatcccgccgcacaacctgcgcgaggtg
aacgaggccgtgcagtggttcctcgaacaccccgaggcctccgatgaggagctgctcgag
gcgtcgatggcacgcgtgaagggccccgacttccccaacggcgcgctgatcgtgggccgc
aagggcatcgaggacgcctatcgcaccgggcgtggctcggtgacgatgcgcgcggtgatc
aacatcgaggaggaccgcaagggccgcaccgagctggtggtcactgaactgccctatatg
tgcaaccccgacaacctggcccagaagatcgccgacctggtgaactccgggcgcctcacc
ggcatctccgacatccgcgacgacagctcggcgcgtaccggccagcggctggccatcatg
ctcaagcgcgacgcccagccgcgcgtcgtgatgaacaacctgtacaagcacacccagctg
caggacaccttcgggtgcaacatgctggcgctggtcgacaatgtgccgcgcacgctgcgc
ctcgaccagttcatccgctactgggtgctgcaccagatcgaggtgatcgtccggcgcacc
gagcaccagctgcagcaggccgagaaggaagcgcacatctaccgcggcctggtgaaggcc
ctcgacatgctcgacgaggtgatcgccctgatccggcgctcgcccaccaccgagcaggcg
tcggcaggcctgcagaagctgctcgacatcgatgacgtgcaggctgccgccatcctgaac
atgcagctgcgtcgcctggccgccctggagcgccagaagatcatcgacaagatgaaggag
ctcgacaccctcatcgccgacctgaaggacatcctggccaaccgggagcgccagcgttcg
atcgtcagcaatgagctgggcgagatcgtcggcaagtacggcgacgagcgtcgcacccag
atcatcgccgccgagggcgatttcagcgacgaggacttcatccccgacgacgacatggtg
gtgaccatcacccgtggtggctacgccaagcgcacccgcaccgaccagtaccgcccgcag
cgtcgtggcggcaagggcgtgcgcggggcaacgctgcgtgccgacgacgaggtgcagcac
ctgttcgccaccaccaaccaccagtggatcctgttcttcaccgaccacgggcgcgtctac
cgcatcaagacctggcaactgcccgagggcggccgcgacgcgaagggcggccacgtggcg
gggctgttgagcttcctgcccgacgagaagatcgcccaggtgttggcgctgcgttcctac
gaggacgccgaatacctggtgctcgccaccaagcagggattggtgaagaagacggccctg
tccgcctacgactcaccgcgccaggcgggcctcatcgcggtgaacttccgtgccgacgac
gatgagctgatcggcgccgagctggtggacgccagcgacgacgtgctgctcatctcccgg
ctcggccaggcgatccgcttccgtgccgacgacgaacagatgcgtccgatgggtcgcacg
acgtcgggcgtcaccggcatgcgcttccgcgagggcgatgaactgctctcgatgagcgtg
gtgcccgccgaacgtggcgaggccagcgacgagcatgccgacgaggaggatgagccgctg
tacgtgttcaccgtgaccaatggtggattcgccaagcgcaccccggtgggcgactaccgc
gtgcagaatcgtggcggactgggcatcaaggcgatgcgcatggacgacgagcgcggccac
ctggtgggtggcctggtggtgaccgactccgacgaggtgatcgcgatcaaggcgtcgggc
caggtgacccgcagctcggtggccgaggtgaatccgaccgggcgcgacacgatgggcgtg
aagttcgtcggcgtgcgcggcaaggacgaggtgatcgccatcgcgctcaacccggagaag
cccgaggaggagggtgagggcgacgagaccgagcccgaggccaccgacgagatgggcaat
gcggtgccggccaccgatgtgatcgaggccgacgccagcgaggacggaaccgccgcggcc
gatgacgacgaggacgcgcgagcgtccgacgagtag
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