Propionibacterium freudenreichii subsp. freudenreichii DSM 20271: RM25_0359
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Entry
RM25_0359 CDS
T03860
Name
(GenBank) Hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pfre
Propionibacterium freudenreichii subsp. freudenreichii DSM 20271
Pathway
pfre03030
DNA replication
pfre03430
Mismatch repair
pfre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RM25_0359
03430 Mismatch repair
RM25_0359
03440 Homologous recombination
RM25_0359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfre03032
]
RM25_0359
03400 DNA repair and recombination proteins [BR:
pfre03400
]
RM25_0359
Enzymes [BR:
pfre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RM25_0359
DNA replication proteins [BR:
pfre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RM25_0359
DNA repair and recombination proteins [BR:
pfre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RM25_0359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
RuvB_N
AAA_22
AAA_30
AAA_14
AAA_5
Rad17
zf-CXXC
Mg_chelatase
AAA_18
AAA_19
AAA_28
TsaE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AJQ90091
LinkDB
All DBs
Position
437986..441390
Genome browser
AA seq
1134 aa
AA seq
DB search
MDGDLDPEGHEAPEDDFFEQDGPALFDDAASTESTSADSTKGTMANSTDTGGVDAPRDEP
LASGEIPTPDAPVAATPDAPAPDNDPGAPLALYRRYRPDTFEQVIGQDHVTLPLQRAIAN
NRVSHAYLFSGPRGCGKTTCARILARCLNCENGPTPTPCGHCTSCRELATGGPGSIDVIE
IDAASHGRVDDARELREGIFFAPVQSRFKIYIIDEAHMVTKEGFNALLKVVEEPPPHVKF
IFATTEPDKVIGTIRSRTHHYPFRLVPPKVLTDYLEKICVEEHVQVEPGVLPLVVRAGAG
SVRDSLSVLDQLLGSAGADGVSYQQATSLLGYTPDALLDEMVDALAAGDGKGVFGTIDKV
IEIGQDPRRFAEDLLQRLRDLVIVADVPDALSSGLIDVAADQAQRFEHQAALIGPGELTR
AAEVIASGLTHMRGTTAPRLHLELMCARILLPGADVDGRGTHARLDRLERRVGMPGVAEE
PAVEQPAPPQWDDQANVSRDPHADAQPGVDDQQGARTRQRSVRDGGSGLSGVGLAGPGYA
DRANQTQMGNAPGTAAGMGVGAPTGGGHAATARQRPAVDQTVAPASGAPRQQRPAAGPAP
DGQATPPGNASRGHAGPTDTGPTSAGPGIAASDQAASDHPAPTDNLGDSPNAGTSHATAA
DGAATGVNTNADNAPGADNAGPAGPAPQATGAQAPSSGDSFPAQAPSSAAGRLNTAEVRR
LWPEVLTAVKGRRRFTWILLSQNAQVLQADVDGLSLAFNSAGARDSFQNGGSNDVLREAL
IDVLGADLPIHCVVEGTAAMNEARGGEPARQRPAPTQQQAPTQHPTSTQHQAPAQQQAPT
QHEAPAGHSAPQDQAAPQRQPGAGQRPAPGQAEPDQSGTGPSEPAQPASDKREGGHQGPP
AEGGERAGGSSQQHQSQQHRDDADQHLADPPEVPRQRAAQAGSPGDDGSHGATGVPDDAA
PARRNGRRRHVIPDLGEVASSMPTEQRDPGWDPWATPQGDAGQPDPHGTGSFGTGPSGTG
SPNAGPNGAGSAGAGPNGSGTRSSTTDGTSTDGPQAAGHAGPRNNAAAPGASGRAPEPHH
EIRWEVPLPDDEPPYDPDADVSMSDPNVDETGKSAAELIISELDAEVIEEIEHG
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
gtggatggcgatctggatcccgagggccacgaggcacctgaggacgatttcttcgagcag
gacggtcctgccctgttcgacgatgccgccagcaccgaatccaccagcgcggacagcacg
aagggaaccatggcgaacagcaccgataccggcggcgtggacgcaccacgcgacgagccc
ctggcgtccggtgagatcccgacgccggatgccccggtggctgctacgcccgacgcgcct
gcgcccgacaacgacccgggggcgccgctggcgctctaccggcgctatcgtcccgacacc
ttcgagcaggtgatcggtcaggaccatgtgaccctgccgttgcagcgtgcgatcgccaac
aaccgggtgagccatgcctacctgttcagcggcccgcgcggctgcggcaagaccacctgt
gcccgcatccttgcgcgctgcctcaactgcgagaacggccccacgcccactccctgcggc
cattgcacgagctgccgtgaactggccaccggagggcccggcagcatcgacgtgatcgag
atcgacgccgcctcccatggccgcgtcgacgacgcccgcgagctgcgcgagggcatcttc
ttcgcaccggtgcaatcgcgcttcaagatctacatcatcgacgaggcccacatggtcacc
aaggagggcttcaacgcgctgctgaaggtggtggaggagccgccgccgcacgtgaagttc
atcttcgccaccaccgagcccgacaaggtgatcggcaccatccgctcgcgcacccaccac
tatcccttccggctggtgcccccgaaggtgctcaccgactacctcgagaagatctgcgtc
gaggaacacgtgcaggttgagcccggcgtcctgccactcgtggtgcgtgccggcgccgga
tcggtgcgtgactcgctgtcggtgctcgaccagctgctcggctcggccggtgccgacggc
gtcagttaccagcaggccacctcgttgctcggctacacccccgatgccctgctcgacgag
atggtcgacgcgctggccgccggtgacggcaagggcgtcttcggcaccatcgacaaggtg
atcgagatcggccaggacccgcgacggttcgccgaggacctgttgcagcggctgcgcgat
ctggtgatcgtggccgacgtgcccgacgccctgagctccggcctgatcgacgtggccgcc
gaccaggcgcagcgcttcgaacaccaggcggcactgatcgggcccggggaactcacgcgg
gccgccgaggtgatcgccagcggcctcacccacatgcggggcaccaccgcgccccgactg
cacctcgaactgatgtgcgcacgcatcctgcttcccggcgccgacgtggacggacgcggc
acccacgcgcgcctcgaccggctggaacgtcgcgtcggaatgcccggcgtggccgaggag
cccgccgtcgagcagcccgcgccaccccagtgggacgaccaggccaatgtcagtcgagac
ccccatgccgacgcccaacccggcgtcgacgaccagcagggtgcccgcacccgacagcgc
tccgtgcgcgacggtggttcagggctcagcggtgtgggcctggcaggtcccggctatgcc
gaccgagcgaaccagacccagatgggcaatgctcccggtaccgccgccggcatgggtgtc
ggtgcgcccaccggtggtggtcatgccgccacggcccgtcaacgccccgccgtcgatcag
acggtcgccccggcatccggtgcgccccgccaacagcggccggctgccggccccgcgcct
gacgggcaggcgacgccgcccggcaacgcttctcgcggccatgctgggcccaccgatact
gggcccaccagcgccgggcccggtatcgccgcgtctgatcaggctgcgtccgatcaccct
gcgccgaccgacaacctcggggacagcccgaacgccggcacatcgcacgccaccgccgct
gatggcgcagcgaccggggtcaatacgaacgccgacaacgccccgggcgccgacaacgcc
gggccggccgggcccgccccgcaggccacgggtgcgcaagccccgtcgtcgggggattcg
ttcccggcgcaggctccttcctccgctgccggccgcctgaacaccgccgaggtgcgcagg
ctgtggccggaggtgctcactgcggtgaagggccgccgtcgcttcacctggattctgctc
agccagaatgcgcaggtgctgcaggccgacgtcgacggcctgtcgctggccttcaactcg
gccggcgcccgggacagcttccagaacggtggctccaacgacgtgctgcgggaagccctg
atcgacgtgctcggcgccgacctgccgatccactgcgtggtggagggtacggccgccatg
aacgaggcgcgtgggggagaacctgccaggcagcgcccagcgccgacccaacaacaggcg
ccaacccaacacccgacatcgacccaacaccaggcacccgcccagcagcaggcgccgacc
cagcacgaggcaccagccgggcattcggcgccccaggaccaggccgcgccccagcggcaa
cccggggctgggcaacgtccggcccccggtcaggcggagcctgatcagtcgggaaccggc
ccatcggaaccggcccaaccggcgtccgacaagcgggaaggcggccaccaaggcccccca
gctgagggcggcgagcgtgcggggggctcgtcgcagcaacaccagtcgcagcaacaccgg
gatgacgcggatcagcacctggccgatccgccggaggtcccgcgccaacgtgccgcgcaa
gccggatcccccggggatgacgggagccatggagcgacgggagttcccgatgacgctgca
ccggcccgccgcaatggccgtcgtcgccatgtgatccccgatctcggcgaggtcgcgtcg
tcgatgcccaccgagcagcgcgatccggggtgggacccgtgggccacgccgcagggcgac
gcaggccagcccgatccacacgggactggctcatttgggactggcccatctgggaccggt
tcacccaatgccggcccgaacggtgccggttcagcaggtgctggtcccaacgggtccggc
acacgctcctcaaccaccgatggaacatccaccgacgggccgcaggcggcgggtcacgcg
ggcccccggaacaacgccgcggcacccggtgcttccggccgcgccccggagccccaccat
gagatccgctgggaggtgcccctgcccgacgacgagccgccctacgatcccgatgccgat
gtgagcatgagcgatcccaacgtcgacgagaccgggaagtcggccgcggagctgatcatc
tccgagctcgacgccgaggtgatcgaggagatcgagcacggctga
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