Propionibacterium freudenreichii subsp. freudenreichii DSM 20271: RM25_0642
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Entry
RM25_0642 CDS
T03860
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pfre
Propionibacterium freudenreichii subsp. freudenreichii DSM 20271
Pathway
pfre03420
Nucleotide excision repair
pfre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RM25_0642
03430 Mismatch repair
RM25_0642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfre03400
]
RM25_0642
Enzymes [BR:
pfre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RM25_0642
DNA repair and recombination proteins [BR:
pfre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RM25_0642
MMR (mismatch excision repair)
Other MMR factors
RM25_0642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AJQ90369
UniProt:
A0A0B7NW05
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All DBs
Position
749938..752427
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AA seq
829 aa
AA seq
DB search
MTDQTPPDLFSAFDQRLSALGAPGSGEGFAPHTPHDAHDDAEALLHGLNPPQEQAVVHEG
SPVLVVAGAGSGKTRVLTRRIAWLIAQRGVHPGSILAITFTNKAAAEMRSRVAELVGPRT
RTMWVSTFHSACVRILRTELAEAPELGLRRNFSIYDDTDTKRLMTLVLRDQNLDTKKFPP
RTVMGWISNAKNELLGPGAAAEQADNGNEELYAQAYEEYQRRLRAANAMDFDDLIMITVQ
LLHDHPDIREKYRRRFRQVLVDEYQDTNHAQYLLIRELCAPNEDQIDAPRVDPPELLVVG
DSDQSIYAFRGADVRNILDFEQDFPGARTILLEQNYRSTQTILSAANAVIQHNSGRPVKK
LWSDAGDGDKIIGWVADTEHDEARWVAEKIDELHDHQQAAYSDAAVFYRTNAQSRAFEEV
FIRLGLPYRVVGGVRFYERREVRDALAYLRAIANPADDVSIRRIINVPKRAIGARAETAL
EMFAVSQSIPFSQAVDRAAEVPGLATRSRHQVESFASMMAGFRGLVAAGSSADEVVAAVL
KDSGLLDELKDSKDPQDETRVENLVELVAVAQEFVAQAHTLDLSAGLRPDAPGDQDAPEL
ADELVAGMPEADDSLGAFLERIALVADSDQIPDSDPDSAGVVTLMTLHTAKGLEFDNVFL
TGMEDGIFPHMRALADPAELSEERRLAYVGITRARRRLFMSRAAVRTVWGQPQYNPPSRF
LEEIPAELIDWQRTGADLTSWGSSASARTASARRQTSTGGPVFGSGHGDLPRTKTVASLE
PGDRVLHSSFGMGTVVAAAGSGNNATADVDFGSAGVKRLALRFAPLEKL
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccagacccctcccgacctgttctccgcctttgaccagcgcctgtcggcgttg
ggagcgccgggtagcggcgaaggcttcgctccccacaccccccacgacgcccacgacgac
gcggaggccctgctgcacggcctgaacccgccgcaggaacaggccgtggtgcacgagggc
tcaccggtgctggtggtggccggtgcgggctcgggtaagaccagggtgctgacacgtcgg
atcgcctggttgatcgcccagcgtggcgtgcatcccggctcgatcctggccatcaccttc
accaacaaggcagccgccgagatgcgctcgcgggtggccgagctggtgggtccgcgcacc
cgcacgatgtgggtgagcaccttccactccgcgtgcgtgcgcatcctgcgcactgagctt
gccgaggcccccgagctcgggttgcggcgcaacttctccatctacgacgacaccgacacc
aagcggctcatgaccctggtgttgcgcgaccagaacctcgacacgaagaagttcccgcca
cgcaccgtgatgggctggatcagcaatgccaagaatgagctgctgggccccggcgccgcc
gccgagcaggccgacaacggcaatgaggaactgtatgcgcaagcctacgaggaatatcag
cgtcggctcagggccgccaatgcgatggacttcgatgacctcatcatgatcaccgtgcaa
ctgctgcacgaccaccccgatatccgcgagaaataccgtcgtcgctttcgtcaggtgctg
gtcgacgagtaccaggacaccaaccatgcgcagtacctgctgatccgcgagctctgcgcg
cccaacgaggaccagatcgacgccccccgcgtggatccgcccgagctgctggtggtcggt
gactccgaccagtccatctatgccttccggggcgccgatgtgcgcaacatcctggacttc
gagcaggacttcccgggggcccgcacgatcctgctggagcagaactaccgctccacccag
accatcctgtcggcggccaatgcggtgatccagcacaactccgggcgtccggtgaagaag
ctgtggagcgacgccggtgatggcgacaagatcatcggttgggttgccgacaccgagcat
gacgaggcccgctgggtggccgagaagatcgacgagctgcacgaccaccagcaggccgcc
tattccgacgccgcggtgttctaccgcaccaatgcccagtcgcgcgccttcgaggaggtg
ttcatccggctgggccttccctatcgggtggtgggcggcgtgcgcttctatgagcgacgc
gaggtgcgcgatgcgctggcctacctgcgggccatcgcgaatccggccgacgatgtctcg
atccgtcggatcatcaacgtgcccaagcgcgccatcggtgcccgggccgagaccgcgctg
gagatgttcgccgtgagccagtcgatcccgttcagccaggccgtggaccgtgccgccgag
gtgcccggactcgccacccgttcgcgccatcaggtggagtccttcgcctcgatgatggcc
ggtttccgcggactcgtggcggcagggtcatcggccgacgaggtcgtggccgcggtgctg
aaggactcgggcctgctcgacgagctgaaggactccaaggacccccaggacgagacccgt
gtggagaacctcgtggagctggtggccgtggcccaggaattcgtcgcccaggcccacacc
ctcgacctgtcggctgggctgcggcccgatgcgcccggcgatcaggatgcccccgaactg
gccgacgaactggtggccggcatgcccgaggccgatgactccctgggtgccttcctcgaa
cggatcgccctggtggccgattccgaccagatccccgattccgatccggactccgccggg
gtggtgaccctcatgacgctgcacaccgccaagggcctggaattcgacaatgtcttcctc
accggcatggaggacggcatcttcccgcacatgcgggccctggccgaccccgccgagctg
tccgaggagcggcggttggcctatgtgggcatcacccgcgcgcgccgacgcctgttcatg
agccgtgcggccgtgcgcaccgtatggggccagccccagtacaacccgcccagtcgcttc
ctggaggagatccccgccgaactgatcgattggcagcgcaccggcgctgacctgaccagt
tggggttcatcggcctcggcgcgtaccgcgtcggcccgccggcagacgagcacgggcggc
ccggtgttcgggtcggggcatggcgacctaccacgtaccaagaccgtcgcctccctggag
ccgggcgatcgggtgctgcactcgagcttcggcatgggcaccgtggtggcggcggccggt
tcggggaacaacgccaccgccgacgtcgacttcggctcggcgggcgtgaagcggctggca
ctgcgcttcgctccgctggagaagctctag
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