Propionibacterium freudenreichii subsp. freudenreichii DSM 20271: RM25_0911
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Entry
RM25_0911 CDS
T03860
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pfre
Propionibacterium freudenreichii subsp. freudenreichii DSM 20271
Brite
KEGG Orthology (KO) [BR:
pfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfre03032
]
RM25_0911
03400 DNA repair and recombination proteins [BR:
pfre03400
]
RM25_0911
Enzymes [BR:
pfre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RM25_0911
DNA replication proteins [BR:
pfre03032
]
Prokaryotic type
DNA Topoisomerases
RM25_0911
DNA repair and recombination proteins [BR:
pfre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RM25_0911
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
Motif
Other DBs
NCBI-ProteinID:
AJQ90633
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Position
1060211..1062316
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AA seq
701 aa
AA seq
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MPDSQSTAKKSAPGKAAQAGREYEAKNLLVLEGLEAVRKRPAMYIGSTDTRGLMHCLWEI
IDNAVDEALAGFGRHIDVRLNADGSIHVADAGRGIPVDIEPRTHLTGVEVVFTKLHAGGK
FGAGSYTATGGLHGVGASVVNALSSRLDVEVDRNGHTWAMSFQRGKPGVFDGPGPSAGFT
PGSGLRKTGRTAKGVTGTRVTYWPDRQIFLKQAQLSAEQLLDRARQTSFLVPGLRITVND
DRGEEPVETTFQHEGGISEFVDFLSVGEPITDVLRLQGSDHFVETVPELDENGAMTPTDV
DRRLDVDVAVRWSNNFDTVERSFVNIIATPKGGTHVQGFERGLVRAFAAGLEGTRLLKSG
EEVIKDDVLEGMTAVVTVRLPEPQFEGQTKEVLGTPPVTRLVARIVESELTEFLKSTKAA
TRAQARLVMEKAVNASRTRLAARAHRENQRRKNALESSSMPPKLKDCRNADGERSELFIV
EGDSALGTALRARNSEFQALLPIRGKILNVQKASVGDMLKNAECASIIQVVGAGSGKTFD
VDQARYGKIIFMADADSDGAHIRCLLATLFFRYMRPMVEAGRIFSAVPPLHRFELTNPKK
GMEKYIYTYSDPEYQRKAAELTKKGIHFKEPQRYKGLGEMDADQLADTTMNPRHRLLRRI
TVDDAAGAADVFELLMGNNVAPRKEFIVEGAYQLDEDRIDV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgccagattcccagtccaccgcaaagaagtcagccccgggcaaggccgcgcaggccggg
cgtgaatacgaggccaagaacctgctcgtgctggaggggctcgaggccgtccgcaagcgt
cccgcgatgtacatcggttcgaccgacacccgggggctgatgcattgcctgtgggagatc
atcgacaatgcggtcgatgaggcgctggcaggctttgggcgccacatcgatgtgcggctc
aacgccgatggctcgatccacgtggctgacgcggggcgcggcatcccggtggacatcgag
ccacgcacccacctcaccggggtcgaggtggtcttcaccaagctgcacgccggtggcaag
ttcggtgcgggcagctacacggccaccggtggcctgcatggcgtgggagcgtcggtggtc
aatgccctgagctcccgcctggacgtggaggtcgatcgcaacggccacacctgggcgatg
agcttccaacggggcaagccgggtgtcttcgacgggcccgggccctcggcggggttcacc
cccgggtccggcctgcgcaagacgggtaggactgccaagggcgtgacgggcacgcgggtg
acctactggcccgaccgccagatcttcctgaagcaggcccagctgtcggccgagcagttg
ctcgatcgggcccggcagaccagcttcctcgtgccggggctgcgcatcacggtgaacgac
gaccgcggcgaggagcccgtggagaccaccttccagcatgagggcggaatcagcgagttc
gtggacttcctgtccgtcggcgaacccatcaccgacgtcctgcggttgcagggcagcgac
cacttcgtggagaccgtcccggagctcgacgagaacggcgcgatgacccccaccgatgtc
gaccgtcgcctcgacgtggatgttgccgtgcgctggtcgaacaacttcgacaccgtcgaa
cgctccttcgtgaacatcatcgcgacgcccaagggcggcacccacgtccagggcttcgag
cgaggcctggtgcgggccttcgccgccggactggagggaacccggctgctcaagagcggc
gaggaggtcatcaaggatgacgtactcgaggggatgaccgcggtggtcaccgtgcgactg
cccgagccccagttcgagggccagaccaaggaggtgctcggcaccccgccggtcacccga
ttggtggccaggatcgtcgagtccgaactcaccgagttcctgaagtccaccaaggccgcc
acccgggcgcaggcccggttggtgatggagaaggccgtcaacgcctcgcggacgcgtctg
gccgccagggcccatcgggagaaccagcgccgcaagaacgcgctggaatcatcgtcgatg
ccccccaagctgaaggattgccgcaatgccgatggggagcgctccgagctgttcatcgtc
gagggtgattccgccctgggcaccgcgctgcgggcccgcaattcggagttccaggcgctg
ctgccgatccgcggcaagatcctcaacgtgcagaaggcctcggttggcgacatgctcaag
aacgccgagtgtgcctcgatcatccaggtggtgggggcggggtcgggcaagaccttcgac
gtggatcaggcccgctacggcaagatcatcttcatggccgacgccgactccgacggggcc
catatccggtgcctgctggcgaccttgttcttccgctacatgcggccgatggtggaggcg
gggaggatattcagtgccgtcccgccgctgcaccgcttcgagctgacgaacccgaagaag
gggatggagaagtacatctacacctactccgatcccgaataccagcgcaaggccgccgag
ctgaccaagaagggcatccacttcaaggagccccagcgctacaagggcctcggtgagatg
gatgccgaccagctggccgacaccaccatgaatccccgccaccgcctgctgcggcgcatc
accgtggacgacgcggccggtgccgccgatgtcttcgaattgctcatgggcaacaatgtc
gcgccccgcaaggagttcatcgtcgagggtgcctatcagctcgacgaggaccgcatcgac
gtgtga
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