Propionibacterium freudenreichii subsp. freudenreichii DSM 20271: RM25_0913
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Entry
RM25_0913 CDS
T03860
Name
(GenBank) DNA gyrase/topoisomerase IV, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pfre
Propionibacterium freudenreichii subsp. freudenreichii DSM 20271
Brite
KEGG Orthology (KO) [BR:
pfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfre03032
]
RM25_0913
03400 DNA repair and recombination proteins [BR:
pfre03400
]
RM25_0913
Enzymes [BR:
pfre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RM25_0913
DNA replication proteins [BR:
pfre03032
]
Prokaryotic type
DNA Topoisomerases
RM25_0913
DNA repair and recombination proteins [BR:
pfre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RM25_0913
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Ortholog
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GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF7342
Motif
Other DBs
NCBI-ProteinID:
AJQ90635
UniProt:
A0A0B7NXT4
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Position
complement(1063363..1065825)
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AA seq
820 aa
AA seq
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MARTKTPPADDFEERIVDVDVSSEMQTSYLEYAYSVIYARALPDARDGLKPVQRRILYGM
SEQRLSPDHPFVKCARVVGDVMGKLHPHGDSAIYDALVRMGQDWSMRLKLVDGHGNFGSL
DAGPAAMRYTECRLAPAAMPMLDGLHEDTVDFRPNYDGKQLEPAVLPAAFPNLLVNGATG
IAVGMATNIPSHNLGEVVAALKYLLKNPDAEVDELMRYVPGPDLPTGGKIVGLDGIRAAY
ATGRGIFRTRATARIEQVSPRRRGIVITELPFAVGPEKIIDQIKVLVRSKKITGISDVKD
LTDLTHGLRLVIEVKNGINPEALLAQLYKHTKLEDSFGINAVALVDGQPRTMTLKEMLQV
YLDHRLEVILRRAKFQLGKAQDRLHLVEGLLLAMIDIDDVIAIIRSSDDVPEARQRLMET
FELDEIQANYILDMQLRRLTKLSRIELETERDELRRRITELTELIDDPDLQRDTVASQLS
EMAATYGSPRRTVLLEGSGAAAALPAQPLEIPDDPCWVMMSSTGLMARMTRPADGDDPGH
LPTSGPRGRHDVVVAAIAVTAHAQFGVLTSHGRLVKAEAIDLPEVVGTANAPSLRGGSRV
EDLLVLTDAERAVGLTTLAEDSAGLALGTRRGVVKRVNPEVLSKDEWDVIRLEDNDEVVG
GVELTDPSDELVFVTSDAQLLHFAADVVRPQGRSGGGVAGVRLTGGSSVVWFGVSPATDA
VVVTLSGASSMLPGAQTGSVKVTPFEEYPPKGRATGGVRCHRFLKGEDGLLLAWVGPQPV
IAAGADGSPVDLPPATGKRDGSGTPATWPITAVSSRTMPH
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcacaaagacgccgcccgccgacgacttcgaggagcgcatcgtcgacgtcgac
gtctcgtcggagatgcagacgtcgtatctcgagtacgcctattcggtgatctatgcccgg
gcactacccgatgcgcgcgacggcctcaagccggtgcagcgtcgcatcctctacggcatg
agcgagcagcgcctgtcccccgaccatccgttcgtcaagtgcgcacgcgtggtgggcgat
gtgatgggaaagctgcacccccacggcgattcggcgatctatgacgccctggtgcgcatg
ggccaggactggtcgatgcggctgaagctggtcgatgggcatggcaacttcggatccctc
gatgccggccccgcggccatgcgctacaccgaatgccggttggcccccgcggccatgccg
atgctcgacggcctgcacgaggacaccgtcgacttccgccccaactatgacggcaagcaa
ctcgagcccgcggtgctgccggcggccttcccgaacctcctggtcaacggcgccaccggc
atcgccgtcggcatggccaccaatattccctcgcacaacctgggcgaggtcgtggcggca
ttgaagtacctgctcaagaacccggacgccgaggtcgatgagctgatgcgctatgtgccg
gggcccgacctgccgaccggtggcaagatcgtcgggctggacggcatccgcgccgcctat
gcgaccgggcgcggcatcttccgcacccgcgcgacggcccggatcgaacaggtgagcccc
cgacgtcggggcatcgtgatcaccgagctgcccttcgcggtgggccccgagaagatcatc
gaccagatcaaggtgctggtgcgttcgaagaagatcaccggcatctccgacgtcaaggac
ctcacggacctcacccatggcctccgcctggtgatcgaggtgaagaacggcatcaatccc
gaggccctgcttgcccagctgtacaagcacaccaagctcgaggactccttcggtatcaat
gcggtggccctggtggatggccagccgcgcacgatgacgctcaaggaaatgctgcaggtc
tacctggaccaccgcctggaggtgatcctgaggcgcgccaagttccagctcggcaaggcc
caggaccgcctgcacctggtcgagggcctcctgctggccatgatcgacattgacgacgtg
atcgcgatcatccggtcatccgacgatgtccccgaggcccgccagcgcctcatggagacc
tttgagctggacgagatccaggccaactacatccttgacatgcagctgcgacgcctgacg
aagctgtcccgcatcgagctcgagaccgaacgcgacgagctgcgccggcgcatcaccgag
ctcaccgagctgatcgacgatcccgacctgcagcgtgacaccgtcgcctcccagctcagt
gagatggccgccacctacggcagcccacgacgcaccgtgctgctcgaggggtccggggcc
gcggcggccctgcccgcccagcccctggagatccccgacgacccctgttgggtgatgatg
agctccaccggattgatggcccgcatgacgcgccccgcggacggggacgatcccgggcac
ctgcccacaagcggtccccggggccgccatgatgtggtcgttgcggcgattgccgtgacc
gcgcacgcccagttcggtgtgctcacctcccacggacggctggtgaaggccgaggcgatc
gacctgccggaggtcgtgggcaccgcgaacgcaccgagcctgcggggcggatcacgcgtc
gaggacctgctggtgctcaccgacgcggagcgggccgtggggctgaccaccctggccgag
gattccgcgggcctggccctgggcacgcgtcgcggggtcgtcaagcgggtcaacccggag
gtcctcagcaaggacgagtgggatgtcatccgccttgaggacaacgacgaggtcgtgggt
ggcgtcgaattgactgacccgtccgatgagctcgtcttcgtcaccagtgatgcccagctg
ctgcacttcgccgcagatgtggtgcgtccccagggccgcagcggcgggggcgtggccggc
gtgcgcctcaccgggggttcctccgtggtgtggttcggcgtgagccccgccaccgatgcc
gtggtggtgaccctgtcgggggcgtcgagcatgctgcccggagcccagaccggaagcgtc
aaggtgacgccgttcgaggagtacccacccaagggccgggccaccggcggggtgcgctgc
caccgcttcctgaagggcgaggacgggctcctgttggcctgggtcggaccacagccggtg
atcgccgccggtgctgacggttcgccggtggacctcccgcccgcgaccggcaagcgtgat
ggttccggaaccccggcgacctggccgatcaccgcggtgagctcccgcaccatgccgcac
tga
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