Propionibacterium freudenreichii subsp. freudenreichii DSM 20271: RM25_0984
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Entry
RM25_0984 CDS
T03860
Name
(GenBank) RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pfre
Propionibacterium freudenreichii subsp. freudenreichii DSM 20271
Brite
KEGG Orthology (KO) [BR:
pfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfre03021
]
RM25_0984
Transcription machinery [BR:
pfre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RM25_0984
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
Sigma70_r1_2
HTH_15
HTH_24
HTH_28
HTH_IclR
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AJQ90702
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Position
1137074..1137928
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AA seq
284 aa
AA seq
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MVAPTTRRQTAAMDATQIASISPRLDAADERELARLIEAGVFAGHALEQDQSPCGASAEE
LRQVVAHGELAWQKFFEGNISLVRCVVARWVPVTHPDSEDLVHEGCMGLVEAIMRFDHAL
GWRFSTLAWYLVSQQVAIAAVGNRSCGSGTVAHARRVARIERARSRASASRGAPVSDREV
ADLVGRSVEAVRRDLGQARRVEADQDILEQTIPDERPVHDVSFLSELADQERRVLELNFG
IRNGRAQTLVQIAEHMGMSVSAVSRLKQRALRRGRALVHAELAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgccgacgacccgccggcagactgccgccatggacgccacacagattgccagc
atctcccctcgcctggacgcagccgatgagcgggagctcgcccgcctgatcgaggccggc
gtctttgccggccatgccctcgagcaggaccagtcgccctgcggtgccagtgctgaggag
ctgaggcaggtggtggcgcacggtgagttggcgtggcagaagttcttcgagggcaatatc
tccctggtgcgttgtgtggtcgcccgttgggtgccggtcacccaccctgattcggaggat
ctggtgcacgagggatgcatgggcctggtggaggcgatcatgcgctttgaccatgcactt
ggatggcggttcagcacactcgcctggtacctggtgtcccagcaggttgccatcgccgca
gtgggtaatcgcagctgtggatcaggcaccgttgcccatgcccggcgcgtggcgcggatc
gaacgtgcccgatcacgcgcgtcggccagccgtggggcgccggtgtcagaccgcgaagtg
gccgatctcgtgggtcgctcggtggaggccgtgcgccgcgacctgggccaggcccggcgc
gtcgaggccgatcaggacatcctggagcagaccatccccgacgaacgacccgtccacgat
gtcagcttcctgtcggaactggccgatcaggaacgccgtgtcctggagctcaatttcggg
atccgcaacgggcgcgcgcagacgctcgtgcagatcgcggagcacatgggaatgagcgtc
tcggcggtgtcccgcctcaagcagcgggccctgcgtcggggccgggcattggtccacgcc
gaactcgccgcctga
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