Propionibacterium freudenreichii subsp. freudenreichii DSM 20271: RM25_1623
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Entry
RM25_1623 CDS
T03860
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pfre
Propionibacterium freudenreichii subsp. freudenreichii DSM 20271
Pathway
pfre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RM25_1623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfre03400
]
RM25_1623
Enzymes [BR:
pfre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RM25_1623
DNA repair and recombination proteins [BR:
pfre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RM25_1623
Prokaryotic type
RM25_1623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AJQ91332
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All DBs
Position
1833746..1834435
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AA seq
229 aa
AA seq
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MNAQPIAQLMAPDWAAALAPQEPQIHAMGKFLRGEIAAGRGYLPDGDKVLRAFSRPMADV
RVLIVGQDPYPTPGHPIGLSFAVNRDVRPLPRSLVNIYQELSSDLGIPPAPHGDLTGWFD
QGVLLLNRCLTVRPGHPASHRGKGWEPVTQAAIEALVARGGPLVAILWGRDAQSLTPMLQ
AGGVPIIASPHPSPLSARSGFFGSRPFSRANAALVGAGAQPIDWDLNER
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcccagcccatcgcccagctcatggcgcccgattgggctgccgcgcttgctccc
caggaaccccagatccacgccatggggaaattcctgcgcggcgagatcgccgccgggcgg
ggataccttcccgatggcgacaaggtgctgcgggccttcagccgtccgatggccgacgtg
cgggtgctcatcgtcggccaggacccctatccgacgccggggcatccgatcggcctgagc
ttcgcggtgaatcgcgacgtccgcccgctgccgcgcagcctggtgaacatctaccaggaa
ctgagctccgacctggggatcccgccggcaccacacggcgacctgaccggctggttcgat
cagggcgtactgctgctcaacaggtgcctcacggtgcggccgggccatcccgcgtcgcac
cggggcaagggttgggagccggtcacccaggccgcgatcgaggcgctcgtcgcgcggggc
gggccgctggtcgccatcctgtggggacgcgatgcccagtcgttgacgccgatgctgcag
gccggcggcgtgccgatcatcgcctcaccgcaccccagcccgctgtcggcccgttccggg
ttcttcgggtccaggcccttcagccgcgccaacgcggcactcgtcggggccggcgcccag
cccatcgactgggacctgaacgagcgctga
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