Propionibacterium freudenreichii subsp. freudenreichii DSM 20271: RM25_1714
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Entry
RM25_1714 CDS
T03860
Name
(GenBank) Type IV secretory pathway, VirD4 component
Organism
pfre
Propionibacterium freudenreichii subsp. freudenreichii DSM 20271
Pathway
pfre03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pfre00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RM25_1714
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Motif
Pfam:
TraG-D_C
T4SS-DNA_transf
TrwB_AAD_bind
DUF4381
DUF6928
Motif
Other DBs
NCBI-ProteinID:
AJQ91423
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Position
1930158..1931936
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AA seq
592 aa
AA seq
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MNQRQAGGMGDELTNAALVGLVGMFGIALVLRAAGSVAAFLTGTPQPDVGAAAALAVLFN
PGDPATALGADGLNPVVYWLVSAALLGGLAAGIVWVWMVLRRHTRKTETDPHRLAGIATS
HEVKTVASAKALLHRAAMLRPSWESPAPQDVGYLLGASRGTKVWASVEDSILLIGPPRSG
KGLHVVINAILDAPGAVVTTSTRPDNLTATLRARRRKGGPVSVFDPQHLAEGIPAGLRWS
PIRGCDDPLTAMIRANGLASATGLSAGGVESGGFWEGKTRTALQSLLHAAALDGRPPAEL
FRWTLDPSAASEAVAILNSHPNAAMGWDDSLAAMIDADPKTRDSIWQGVSLALAALADPR
VLDAVTPGPHEHFDPETFLTEQGTLYLLATGAGAGASASLVAAFVEDLIETARRLAARSP
GARLDPPVLLALDEIGNLAPLPSLPTLMAEGGGTGITTMPVLQSLAQARDRWSEHQAGAI
WDASIVKIILGGASNSRDLQDLSTLIGERDEYTDSVTLGDHGTRSNQRSIRRVPILPPDR
IRTLPFGTGITMLRSAPPIVTDLRAWPTRSDDAQLRSDRDELEALLRHRPAS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcggcaggccgggggcatgggcgacgaactcaccaacgccgccctcgttggc
ctggtcggcatgttcgggatcgctctcgtcctccgtgccgctggcagcgtcgccgcgttc
ctcaccggcacaccgcagcccgacgtcggcgcagcggcggcgctcgccgtgctgttcaac
cccggcgacccggcgaccgcgctcggtgccgacggactcaacccggtggtttactggctc
gtcagcgcggcactgctcggcggactcgccgccgggatcgtttgggtctggatggtcctg
cgccgacacacgcggaagacagagaccgacccgcaccgactcgccgggatcgcgaccagc
cacgaggtcaagaccgtggcatccgcgaaagcgctgcttcaccgcgcggccatgctgcgg
ccctcatgggagtcgccagcaccacaagatgtcggctacctcctgggtgccagtcgcggg
acgaaggtctgggcatcggtcgaagactcgatcctgctgatcggcccgccccgctccggc
aagggcctgcacgtcgtcatcaacgcgatcctcgacgcacccggcgcggtcgtcaccacc
agcacgcggcccgacaacctcaccgcgaccctccgcgcccgacgccgcaagggcggaccg
gtctccgtattcgaccctcaacacctcgccgaaggcatccccgccgggctgcgctggtca
cccattcgcggctgcgacgatccgctgaccgcgatgatccgcgccaacggcctcgcctcc
gccacaggactctccgcgggaggggtcgagtcaggcgggttctgggaaggcaaaacccgc
accgcactccaaagcctgctgcacgccgcagcgctcgacggccgcccgcccgccgagctg
ttcaggtggaccctcgatcccagcgccgcatccgaggccgtcgcgatcctcaactcccac
ccgaacgccgcgatgggctgggacgactccctggccgcgatgatcgacgccgaccccaag
acccgcgacagcatctggcaaggtgtctccctcgcgctcgccgcactcgccgacccacga
gtgctcgatgcggtcacaccaggcccgcatgagcacttcgaccccgagaccttcctcacc
gaacaaggcaccctctacctgctcgccaccggtgccggtgcaggagcctccgcatcgctg
gtcgcggcattcgtcgaagacctcatcgaaaccgcccgcaggctcgccgcccgctcaccc
ggagcgcgactcgacccgccagtgctgctcgcgctcgacgagatcggaaacctcgcacca
ctgccgtcactgccgacgctcatggccgaaggcggtggcaccgggatcacgaccatgccg
gtcttgcagtccctcgcacaggctcgcgaccgatggagtgaacaccaggccggcgcgatc
tgggacgccagcatcgtcaagatcatcctcggcggcgcgtcgaacagccgcgaccttcaa
gacctctccaccctcatcggtgagcgtgacgagtacaccgacagcgtgaccctcggcgac
cacggcacccgctcgaaccaacgctcgatccgccgcgtcccgatcctgcctccagaccgc
atccgcaccctgccattcggcaccggcatcacgatgctgcgctccgcgccacccatcgtc
accgacctgcgggcctggccgacacggtctgacgacgcgcagctccgcagcgatcgcgac
gaactcgaagcgctgctgcgccaccgccccgcctcctga
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