Propionibacterium freudenreichii subsp. freudenreichii DSM 20271: RM25_2298
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Entry
RM25_2298 CDS
T03860
Name
(GenBank) Decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pfre
Propionibacterium freudenreichii subsp. freudenreichii DSM 20271
Pathway
pfre00300
Lysine biosynthesis
pfre00470
D-Amino acid metabolism
pfre01100
Metabolic pathways
pfre01110
Biosynthesis of secondary metabolites
pfre01120
Microbial metabolism in diverse environments
pfre01230
Biosynthesis of amino acids
Module
pfre_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfre00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RM25_2298
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RM25_2298
Enzymes [BR:
pfre01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RM25_2298
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Motif
Other DBs
NCBI-ProteinID:
AJQ92001
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All DBs
Position
2577001..2578710
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AA seq
569 aa
AA seq
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MTEEPTLREACQGTPPLSARLEPWMQELLADPATCSSLLERYGSPLNVHDFSALPRNAAE
LTEVAEGSGVDLRIFVARKANKTLGMVRAAHRAGLGVDVGSERELGQVLEAGVPPHDVVV
TAAIKPDPVLRLALESRSLLVLDNLDEVAASRRVAEQVTGARSAEPGRPADGASGAPEPF
PVALRLAPKPSDLIPPTRFGESARAWLELIDSGGLGDLLRVDGVHFHLHGYDPTARATAL
GEALELIDALRERGLAQDGAFVDIGGGIPMSYLDDAEQWDAFWQAHERQAPESGLGGGAR
AADDDRPAAAPDAGEDAPTAPLTWRREPLRQVYPYHQQVIRGPWLERFLGHEIRPGATAG
QALRERGVQLRCEPGRSMMDGCGMTLARVIQRTSASDGVPLVGLEMNRTQCRSTSDDFLV
DPILVRTGTRDDATDPSVAGAGQSRASERFEGFLVGAYCIEAELILRRRLAFPQGVAVGD
VIALPNTAGYLMHILESASHQIPLASNVERVGGGEAGGSGGDHPSAEVADRSRTGGTDHS
STAVEGSDPRPDVPGFKRDGIDRVLPIRA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaggaacccaccctgcgcgaggcatgccagggaaccccgccgctgtcggctcgt
ctggagccgtggatgcaggagctgctggcggaccctgcgacctgcagctcgctgctggag
cgctacggaagcccgctgaacgtgcacgacttttccgcgctgccgcgcaacgccgcagag
ctcacggaggtggccgagggctccggggtggacctgcggatcttcgtggcacgcaaggcc
aacaagaccctcggcatggtgcgtgccgcgcatcgcgccgggctgggggtcgacgtgggc
agcgagcgcgagctgggccaggtgctcgaggccggtgtgccgccgcatgacgtggtggtc
accgcggccatcaagcccgatccggtgctgcgcctggccctggagtcccgctcactgctg
gtgctggacaacctcgacgaggtggccgcctcccggagggtcgccgagcaggtcaccggc
gcccggagcgcggaaccaggtcgccccgcggacggggcctctggtgcccccgagccgttc
cccgtggcgctgcgcctcgcgcccaagcccagcgacctgatcccgcccacccgcttcggg
gagtcggcccgcgcctggctcgagctgatcgactccggcggcctgggcgacctgctgcgg
gtggacggtgtgcacttccacctgcacggctatgacccgaccgcgcgcgccaccgccctc
ggggaggcgctggagctgatcgacgcgctgcgcgagcgcggcctggcccaggatggcgcg
ttcgtggacatcggcggcggcatcccgatgagctacttggacgatgccgagcagtgggac
gccttctggcaggcccacgagcggcaggccccggagtcgggcctcggcgggggtgctcgc
gcggccgacgacgaccggcccgcggctgcccccgacgccggcgaggacgcccccaccgcc
ccgctgacctggcgccgggaaccgctgcggcaggtgtacccctaccaccagcaggtgatc
cgcgggccctggctggagcggttcctgggccacgagatccgcccgggtgccactgccggg
caggccctgcgagagcgcggggtgcagctgcgctgcgagccgggccgctccatgatggac
ggttgcggcatgacgctggcgagggtcatccagcgcaccagtgccagcgacggcgtgccc
ctggtggggctggagatgaaccgcacccagtgccgctccacctccgacgacttcctggtg
gacccgatcctggtgcgcaccggcacacgcgacgatgccacggatccgtcggtcgccggt
gccgggcagagcagggcgagcgaacggttcgaggggttcctggtgggcgcctactgcatc
gaggccgagctgatcctgcgtcggcgcctcgcgttcccgcagggtgtggccgtgggcgat
gtgatcgccctgcccaacaccgccgggtacctgatgcacatcctggagagcgcgtcccac
cagatccccctggcctccaacgtggagcgcgtcggcggtggggaggcaggcggatccgga
ggtgaccaccccagcgcagaggtggcggaccgcagcaggacgggcggcacggaccacagc
agcaccgccgtcgaaggcagcgatccccgtcctgatgtgcccgggttcaagcgcgacggc
atcgaccgggtgctgcccatccgggcctga
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