Peribacillus frigoritolerans: L8956_00115
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Entry
L8956_00115 CDS
T08180
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pfri
Peribacillus frigoritolerans
Pathway
pfri03030
DNA replication
pfri03430
Mismatch repair
pfri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L8956_00115 (dnaX)
03430 Mismatch repair
L8956_00115 (dnaX)
03440 Homologous recombination
L8956_00115 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfri03032
]
L8956_00115 (dnaX)
03400 DNA repair and recombination proteins [BR:
pfri03400
]
L8956_00115 (dnaX)
Enzymes [BR:
pfri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L8956_00115 (dnaX)
DNA replication proteins [BR:
pfri03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L8956_00115 (dnaX)
DNA repair and recombination proteins [BR:
pfri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L8956_00115 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_30
DnaX_C
AAA_22
AAA_5
Mg_chelatase
AAA_assoc_2
AAA_16
AAA_2
TIP49
AAA_19
AAA_24
PIF1
T6SS_VasJ
AAA_18
Rad17
AAA_14
AAA_7
AAA_28
RNA_helicase
AAA_17
TsaE
nSTAND3
Pox_A_type_inc
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ULM97260
LinkDB
All DBs
Position
24345..26033
Genome browser
AA seq
562 aa
AA seq
DB search
MGYQALYRVWRPQQFIDVVGQEHVTKTLQNALVGQKVSHAYLFSGPRGTGKTSAAKILAK
AVNCEHAPTSEPCNECATCRGITDGSISDVIEIDAASNNGVEEIRDIRDKVKYAPNAVTY
KVYIIDEVHMLSQGAFNALLKTLEEPPKHVIFILATTEPHKIPLTIISRCQRFDFKRIQP
QDIVGRMSQIIAETGVSCDEQALHIIARAAEGGMRDALSLLDQAISFSSETVSVEDALTV
TGSVSQAFLSRLAKAIYDKEVAVALEVLEELLAMGKDPARFIEDMIYYFRDMLLFQTAPA
LAESFERVLIDPQFKELAEVISSESIYSIIESFNQTQQDMKWTNHPRIFLEVALVKLCNE
QRPNQIDNGQLQQLQQKIEDLEKKLLEMQKNGIPAAMAEKPAEQAKAQRAVKKSYKAPAG
KINQVLKQATKPGLNAVKSKWGEVLEQLGLHNQKSLAALLTEAEPVAASTEAFVVKFKYD
IHCQMAMENNRFVEVIASIMQQLTGHRMEIAGVPESQWQRLREDFISTQQFDGPEETESK
EEDPFIAEARKLVGDDLLEIKE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gtggggtatcaagcattataccgggtatggcggccgcaacaattcattgatgtagtcgga
caggaacatgtgacgaaaacgttgcagaatgctttggtcgggcaaaaggtttcacatgcc
tatttattttccggtccacgtggaacagggaaaacaagtgctgccaaaattctagcaaaa
gcagtgaattgtgagcatgcaccgacaagtgagccctgtaacgaatgtgctacctgccgc
ggaatcaccgatggctccatatcagatgttatagaaattgatgcagcatccaataatggt
gtcgaggaaatccgtgacattcgtgataaggtcaaatatgcacctaacgcggttacatat
aaagtttatatcattgatgaggtacatatgctttcacaaggggcgttcaatgcgctttta
aagacattggaagaacctccgaagcacgtgattttcatattggcgacgactgagcctcat
aagattccactaacgatcatttcccgttgccaaaggtttgattttaaacggatccagcct
caagatatagttggccggatgtcacaaatcattgcagaaacaggtgtttcttgtgatgaa
caagccctgcatatcattgcgagggcagccgaaggcgggatgcgggatgcactaagcctt
cttgatcaagcgatatccttcagttcggagacggtttcagtggaagatgcattgactgta
accggatctgtttcgcaagcgtttttaagccggctggcaaaagctatatatgataaagaa
gtagcggtggcacttgaagtccttgaagaattgctggccatgggaaaagacccggctagg
ttcatagaagacatgatttattacttccgtgacatgcttttgtttcaaacggcaccggca
ctggcagaatccttcgagcgtgttttgatagatccccaattcaaggaattggcagaagta
atttcttctgaatcgatttactccataattgaaagcttcaatcaaacacagcaggatatg
aaatggacaaatcatccaaggattttccttgaggtggcacttgtcaagttatgtaatgag
caaaggccaaatcaaattgataacgggcagcttcaacagctgcagcagaaaatagaagat
ttagagaagaaattactcgaaatgcagaaaaacggcattccggcagccatggcagaaaaa
cctgcagagcaggctaaggcgcaaagggccgttaaaaagtcatataaagcacctgccgga
aagatcaatcaagttttgaaacaagctacaaagccaggtcttaatgctgtgaaaagtaag
tggggggaagtgcttgaacagttaggtctgcataaccaaaagtcattggcagctttatta
acggaggcagaacctgttgctgcgtcaactgaagcttttgtggtaaaattcaaatatgat
attcattgtcaaatggcaatggaaaataaccgtttcgtggaagtgatagcctcgatcatg
cagcaattgaccggacaccgaatggagatagctggagttccggaaagccagtggcaaagg
ttgcgggaggacttcatctcaacacagcagttcgacggtccagaagaaacggaatcaaaa
gaagaagacccctttatagcagaggctagaaaattagtcggcgatgatttacttgaaatt
aaagaataa
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