Peribacillus frigoritolerans: L8956_00560
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Entry
L8956_00560 CDS
T08180
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pfri
Peribacillus frigoritolerans
Brite
KEGG Orthology (KO) [BR:
pfri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfri03400
]
L8956_00560 (radA)
DNA repair and recombination proteins [BR:
pfri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
L8956_00560 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_22
Lon_C
RecA
Rad51
AAA_14
nSTAND3
AAA_24
SLFN-g3_helicase
AAA_16
NTPase_1
ATPase_2
ABC_tran
AAA
KdpD
Elong_Iki1
KTI12
GvpD_P-loop
NACHT
AAA_5
NPHP3_N
ATP-synt_ab
AAA_31
AAA_30
divDNAB
ArsA_ATPase
DUF7129
MCM
DUF7125
AAA_19
CbiA
AAA_11
HypA
DUF2642
Bac_DnaA
DAP3
Motif
Other DBs
NCBI-ProteinID:
ULM97321
LinkDB
All DBs
Position
105906..107294
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AA seq
462 aa
AA seq
DB search
MAVKKKTKFMCQSCGYESAKWMGKCPGCGEWNKMVEETEIVKPARKGAFTHSEVRVSGER
EKAAPITTIQSEKEPRIKTDLMELNRALGGGIVQGSLVLIGGDPGIGKSTLLLQVSSQLA
HKQKKVLYISGEESVKQTKLRADRLGTMSENLFVYSETDMDYIQQAITDVKPDLVIIDSI
QTVYHSEVTSAPGSVSQVRECTASLMRIAKTNGIAIFIVGHVTKEGAIAGPRLLEHMVDT
VLYFEGERHHTYRIIRAVKNRFGSTNEMGIFEMKEHGLEEVANPSEIFLEERSQGASGST
VVASMEGTRPVLVEIQALISPTSFGNPRRMATGIDHNRVSLLMAVLEKRVGLLLQNQDAY
LKVAGGVKLDEPAIDLAVAISIASSFRDKPTNPADCIIGEVGLTGEVRRVSRIEQRVQEA
AKLGFERVIIPANNIGGWTAPKGIKIIGVSSVSEALKQSLGG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaaaaaagaaaacaaaatttatgtgtcaatcttgtgggtatgagtccgcgaaa
tggatggggaaatgcccaggctgcggtgaatggaacaaaatggtcgaggaaaccgaaatc
gttaaacctgcaagaaaaggcgcttttacccattcagaggttagagtttccggggaacgg
gagaaggcagcacccataacgaccattcagtcagaaaaagaaccacgcattaagacggat
ctaatggaattgaatcgtgctcttgggggcgggatcgtacagggatcacttgtattgatc
ggaggggacccgggtatcggtaagtccaccctgcttctacaggtatcatcccaattggcg
cataaacagaaaaaagtgctttatatatcaggtgaagaatcagtcaagcagaccaaattg
agagcggaccggcttgggacaatgtcggaaaatctattcgtttattctgaaaccgatatg
gactatatccaacaggcaattacagacgttaaaccggatttggtcattattgactcgatt
caaacggtttaccattcagaggttacatctgccccgggaagcgtttcacaagtgagggaa
tgcacagcctcactcatgcgcattgctaaaacgaacgggatcgcgatttttatcgtcggt
cacgttacaaaagaaggggccattgcgggaccacggctgcttgagcacatggttgacacc
gtattatattttgaaggggaaagacaccatacatatcgaattatacgtgcggttaaaaat
cgctttggttcgactaatgagatgggtatttttgaaatgaaagaacatggattggaagag
gtggcgaatccatcggaaattttccttgaagaacggtcgcaaggagcttcggggtccaca
gtcgtcgcatccatggagggcacaaggccggtgcttgttgaaattcaagcattgatttct
cctacgagttttggcaatccgaggcggatggccacgggaattgaccacaatcgagtttcg
cttttaatggctgtcctggaaaagagagtgggcttgctgctccaaaaccaagatgcgtat
ttaaaggttgctggcggtgtcaagctggatgaaccggcaattgacctcgctgtcgcaata
agcattgcatcaagcttccgtgataaaccaacaaaccctgccgattgcatcattggtgaa
gtggggctgactggtgaagtgagaagggtgtcacgaattgaacaaagggtgcaggaagcc
gcgaaattagggtttgagcgggttatcataccggctaataatataggagggtggaccgcg
ccgaaaggtattaagatcattggtgtttcatcggtttctgaggctcttaaacaatcgtta
gggggttaa
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