Peribacillus frigoritolerans: L8956_03050
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Entry
L8956_03050 CDS
T08180
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
pfri
Peribacillus frigoritolerans
Pathway
pfri02020
Two-component system
pfri02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pfri00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L8956_03050 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L8956_03050 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfri03021
]
L8956_03050 (rpoN)
Transcription machinery [BR:
pfri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L8956_03050 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_3
HTH_IclR
MarR
Motif
Other DBs
NCBI-ProteinID:
ULM97739
LinkDB
All DBs
Position
complement(632189..633547)
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AA seq
452 aa
AA seq
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MQVGFELYQKQTLKLSLTPELQQSINILQYSTHELIDFLNRQAYENPVLEISFKESPSSH
SIRTNKINSQIRGSSSKSKGFNGDNDYNPINNHSVSTETLETHLLEQLSLLSSLNAFEKK
ILQFLIGNLNDYGFLELDVHWTASHFSVPVEEIENMIQILQSLDPIGVGAKDLTDCLLIQ
LREHENHNELAYKIVKKHLEDLAEKRYRKIAALHQVTVQEVQEASDFIRTLNPRPVSHFS
DDMTHYIVPDVYVEKDKEGFLITVNDSCTPKLSINPYYKNHVANNSVNPAKDYIKGHIND
AQLLLKGIEQRQMTLYKVTASIVEEQHEFFMKGITGLKPMTLKDISEKLQLHESTISRAT
SNKYIQTPHGLFKLRNFFTRGLHRVNSPATESTATIKEKIKVLIADEDKIKPFSDQKLCQ
IFENEGTKISRRTIAKYREDLGIPGSSKRRRF
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtaggatttgaactgtaccaaaaacaaaccttgaagttgtcattaacccctgaa
ttacagcaatcgatcaatatccttcaatattccacccatgaactgatagatttccttaac
cggcaggcttacgaaaatcccgttctcgaaattagctttaaagaatccccctcatcgcac
agtattcgtacaaataaaataaattctcagatacgcggttcttcctctaaaagtaaaggt
ttcaacggagacaatgattacaaccctatcaacaatcattcagtcagcacagaaacactt
gaaacgcatttactggaacaattgagtttactaagttcattgaatgcatttgaaaagaag
attctccaatttttgattggaaacttaaatgattatggatttctagaattggatgtccat
tggactgcttcgcatttttccgtacccgtggaagaaatcgaaaatatgattcaaatattg
caatcccttgacccaattggagtcggtgctaaagatctgaccgattgtttactcattcag
ctgcgtgagcatgagaatcacaatgaattggcgtataagatcgttaaaaagcacttagaa
gatttagcagaaaaacgctacaggaaaattgccgcccttcaccaagtgaccgttcaggaa
gtacaagaggcctcggatttcatccgtacgttaaacccgcgtcctgtcagtcacttttcc
gatgatatgactcattacatcgttccggacgtttacgtggaaaaagataaagaaggtttt
ctgataacggtcaacgatagctgtacacctaaactttccatcaatccttactacaagaac
cacgtcgccaacaattctgttaatccagctaaagattatataaaagggcacataaatgat
gcccaattactgttaaaagggatcgaacaaaggcaaatgacgctttacaaagtgaccgcg
tcaatcgtggaggagcagcatgagtttttcatgaagggaattacaggattaaaacctatg
acactgaaggatatttcggaaaaacttcagcttcatgaatcaacgatcagcagggcgacg
agcaataaatatatccagacgccgcatggcctctttaaactaaggaacttctttactaga
gggttacaccgcgtgaacagcccagcaaccgaatcaacggccaccatcaaagaaaaaata
aaggtcctgattgccgatgaagataaaataaagcctttttcagatcagaaactttgtcaa
atatttgaaaatgaagggacgaagatttcccgccgcactattgcaaaataccgtgaagac
ctcggtataccgggatcttcaaaacggcgcagattttaa
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