Peribacillus frigoritolerans: L8956_06035
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Entry
L8956_06035 CDS
T08180
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pfri
Peribacillus frigoritolerans
Brite
KEGG Orthology (KO) [BR:
pfri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfri03019
]
L8956_06035 (yhaM)
Messenger RNA biogenesis [BR:
pfri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L8956_06035 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
DUF2130
Motif
Other DBs
NCBI-ProteinID:
ULM98268
LinkDB
All DBs
Position
1264769..1265707
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AA seq
312 aa
AA seq
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MGNGIIHYGIGEVVDIYMYIKTSTKAVASNGKPFLTLILCDKTGEIEAKLWDVSEADEKT
YCAEATVKVQGEVQNYRGRSQLKIRNIRITSDTDGVTKADLIQTAPLSQEEMMETITQFI
FEMRNPNIQRVTRHLIKKYQNEFLTFPAATKNHHEYMSGLAYHVVSMLGLAKSISTLYPS
LNKDLLYAGVILHDLGKVHELSGPVSTVYTVEGNLLGHITIMVNEVGKAAEELGIEAEEI
MILKHLILSHHGKAEWGSPKPPMVREAEVLHYIDNMDAKINMMDRALEKVKPGEFTERVF
ALDNRSFYKPTF
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgggatcatacactacggaattggtgaagtagtagatatatatatgtacatt
aaaacgagtacaaaagcggtggcaagtaatggaaagccttttttaacattgattttgtgc
gataaaaccggcgagatagaggcaaagctatgggatgtttccgaggctgatgagaaaaca
tactgtgcggaagcaacagtgaaagttcaaggggaagtccagaattatcgaggacgcagc
caattgaaaatccgtaatattagaattacttcagatactgacggggtcacgaaagccgat
ttaattcaaacggctcctttaagtcaggaagaaatgatggaaaccatcactcaatttatt
tttgaaatgaggaatccgaatatccaaagggtgactaggcatctcataaaaaaatatcaa
aatgaattcctgacgttccctgctgccaccaagaaccatcatgagtatatgtcgggactg
gcctatcacgttgtatcgatgctagggctggctaagtccatttcaaccctatatccttcc
ctcaataaggatcttttgtatgcaggggtcattctgcatgaccttggaaaggttcatgag
ctatctggacctgtttcgactgtttatacagtggaagggaacttgttgggacatatcacc
atcatggtgaatgaagtcggtaaagctgcagaggaattgggcattgaagcggaagaaatc
atgattctcaagcacctgatattaagccaccatggtaaagctgagtggggcagtcccaag
ccgccgatggttagggaagcggaagtgctgcattatattgataatatggatgccaagata
aatatgatggaccgcgccttggaaaaagtgaagccgggtgaatttacggaaagagtcttc
gcgctcgataatcgttcattctataaaccgacattttaa
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